Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC50Q8IVM0 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 OR5T3-201ENST00000303059 1023 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 ENSAP1-201ENST00000392855 326 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 RN7SKP177-201ENST00000410567 355 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AL691449.1-201ENST00000426570 421 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 NPM1P24-201ENST00000428039 894 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 HMGB3P5-201ENST00000428894 612 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AC083863.1-201ENST00000438811 231 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 RPS17P13-201ENST00000448974 407 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AC108120.2-201ENST00000512973 294 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AC034205.1-201ENST00000520621 638 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 C1GALT1P3-201ENST00000522049 819 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 HAUS1P3-201ENST00000523909 662 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 NOP56P3-201ENST00000549457 385 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 RN7SL600P-201ENST00000581811 299 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AC011472.4-201ENST00000615848 491 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AL445567.2-201ENST00000618935 498 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 MIR6758-201ENST00000620653 63 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 MIR7153-201ENST00000637758 57 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 RIOK3P1-201ENST00000418778 1528 ntBASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC50Q8IVM0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 RNU4-6P-201ENST00000410804 122 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 RNA5SP498-201ENST00000411342 120 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AC013404.1-201ENST00000413068 249 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 TBCAP1-201ENST00000436520 327 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 RPL23AP12-201ENST00000467573 473 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AC108157.1-201ENST00000510511 539 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 RNA5SP179-201ENST00000517284 121 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 OR4A12P-201ENST00000530847 918 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 PDCL2P2-201ENST00000533651 189 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 MIR5047-201ENST00000579212 100 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 MIR548Y-201ENST00000582739 110 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AP003117.1-201ENST00000602771 554 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AC091167.4-201ENST00000605079 184 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 KATNBL1P1-201ENST00000605192 748 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AC242628.1-201ENST00000606810 391 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AL355802.4-201ENST00000607635 548 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AC139769.3-201ENST00000618383 175 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 AC015726.3-201ENST00000624501 418 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 MIR7641-1-201ENST00000627518 61 ntBASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CCDC50Q8IVM0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.09□□□□□ -1.76
CCDC50Q8IVM0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
CCDC50Q8IVM0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC50Q8IVM0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.09□□□□□ -1.76
CCDC50Q8IVM0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC50Q8IVM0 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC50Q8IVM0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 AC126755.2-208ENST00000327792 462 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 AC138969.1-213ENST00000331436 462 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 RNA5SP130-201ENST00000364431 114 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 SNORA62.2-201ENST00000364672 152 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 RNU6-185P-201ENST00000384421 107 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC50Q8IVM0 SKP1P1-201ENST00000438081 489 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms