Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNA5SP455-201ENST00000365190 119 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AL672167.2-201ENST00000377164 879 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 RNU6-1011P-201ENST00000384668 107 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 NCSTNP1-201ENST00000406229 144 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AL139098.1-201ENST00000407291 389 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC002524.1-201ENST00000411687 547 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC138393.2-201ENST00000414742 246 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 MTND1P14-201ENST00000427400 950 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 PA2G4P6-201ENST00000438325 1197 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 TCEA1P1-201ENST00000449716 880 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 IGHV5-78-201ENST00000450948 295 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 MTND3P10-201ENST00000450967 341 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 OR6C5P-201ENST00000452388 923 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC098824.1-201ENST00000453565 980 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC021660.1-201ENST00000465006 554 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VRK3Q8IV63 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC098799.2-201ENST00000509466 868 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC004980.4-201ENST00000513375 203 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC087808.1-201ENST00000520501 361 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC012339.2-201ENST00000523996 453 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC092490.3-201ENST00000545370 572 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 NIFKP8-201ENST00000560500 874 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 MIR4691-201ENST00000583764 85 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC012065.4-201ENST00000602445 679 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC007038.2-201ENST00000608095 740 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC128687.2-201ENST00000609657 566 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 STMN1P1-201ENST00000617809 440 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 MIR6719-201ENST00000622428 87 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 AP005432.1-201ENST00000580891 3485 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC093909.5-201ENST00000621839 1799 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC109315.1-201ENST00000584143 1347 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC008079.2-201ENST00000623543 20396 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.94□□□□□ -1.62
VRK3Q8IV63 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VRK3Q8IV63 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 RNU6-181P-201ENST00000363225 107 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 SNORA4.1-201ENST00000364263 144 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VRK3Q8IV63 XGY1-201ENST00000381172 446 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 AL590002.1-201ENST00000406554 418 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 MIR1277-201ENST00000408536 78 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 RNU4-34P-201ENST00000410431 124 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC013404.1-201ENST00000413068 249 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 DDX39BP1-205ENST00000422507 192 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 TXNP5-201ENST00000441043 315 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC114755.5-201ENST00000447760 831 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 RN7SL515P-201ENST00000463999 297 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 RPL9P6-201ENST00000492764 598 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 RPS26P24-201ENST00000497656 331 ntBASIC4.94□□□□□ -1.62
VRK3Q8IV63 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
VRK3Q8IV63 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.94□□□□□ -1.62
VRK3Q8IV63 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms