Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF135Q8IUD6 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AL161781.1-201ENST00000354277 403 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 SNORD42.2-201ENST00000365570 69 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 RNU6-43P-201ENST00000384302 107 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 RPL36P18-201ENST00000419316 318 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AL358176.2-201ENST00000425769 204 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 MRPS21P3-201ENST00000436696 262 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 GTF2IP13-201ENST00000438487 386 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AC011742.2-201ENST00000443818 352 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 DDX3P2-201ENST00000446138 111 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 RN7SL561P-201ENST00000488553 281 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AC005912.1-201ENST00000495392 255 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 RNA5SP206-201ENST00000516703 121 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 RNA5SP337-201ENST00000517007 109 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 RNA5SP340-201ENST00000517132 107 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AC027026.1-201ENST00000532323 742 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 LSM6P2-201ENST00000552208 177 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AC009318.4-201ENST00000620496 486 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 AC083806.2-201ENST00000617795 2685 ntBASIC6.76□□□□□ -1.33
RNF135Q8IUD6 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.76□□□□□ -1.33
RNF135Q8IUD6 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 AC091046.3-201ENST00000631455 1574 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 AC011155.1-201ENST00000316512 456 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 RNU6-1309P-201ENST00000363305 108 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 RNU6-606P-201ENST00000384721 111 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 RPL7P60-201ENST00000397636 735 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 PPP1R2P5-201ENST00000457256 603 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 Y_RNA.639-201ENST00000458981 102 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 Y_RNA.631-201ENST00000459607 101 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 AC007547.1-201ENST00000462177 490 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 SLC25A51P1-201ENST00000468432 871 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 RPL23AP41-201ENST00000484754 458 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 AC022415.1-202ENST00000486612 523 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 AC090096.1-201ENST00000489168 390 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 TXNP6-201ENST00000510190 310 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 AC108043.1-201ENST00000512696 574 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 SCARNA24.1-201ENST00000516465 137 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 Y_RNA.711-201ENST00000516993 102 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 EIF4A2P5-201ENST00000529914 499 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.75□□□□□ -1.33
RNF135Q8IUD6 AC068831.4-201ENST00000556118 109 ntBASIC6.75□□□□□ -1.33
RNF135Q8IUD6 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms