Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC010200.2-201ENST00000605098 235 ntBASIC3.36□□□□□ -1.87
LRRC28Q86X40 AC099676.1-201ENST00000608886 657 ntBASIC3.36□□□□□ -1.87
LRRC28Q86X40 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRC28Q86X40 AC009318.3-201ENST00000616916 503 ntBASIC3.36□□□□□ -1.87
LRRC28Q86X40 AC092628.2-201ENST00000622492 339 ntBASIC3.36□□□□□ -1.87
LRRC28Q86X40 U6.98-201ENST00000637157 84 ntBASIC3.36□□□□□ -1.87
LRRC28Q86X40 CASC19-284ENST00000642142 1868 ntBASIC3.36□□□□□ -1.87
LRRC28Q86X40 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRC28Q86X40 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRC28Q86X40 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRC28Q86X40 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LRRC28Q86X40 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
LRRC28Q86X40 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRC28Q86X40 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRC28Q86X40 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRC28Q86X40 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC28Q86X40 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC28Q86X40 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC28Q86X40 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC28Q86X40 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC28Q86X40 RNA5SP399-201ENST00000364003 117 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 RNU6-283P-201ENST00000364788 107 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 AL445189.1-201ENST00000405722 338 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC28Q86X40 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC28Q86X40 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 RANP8-201ENST00000444720 713 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 HMGB3P8-201ENST00000449709 577 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 RPS11P1-201ENST00000451072 473 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC006539.3-201ENST00000454258 129 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC078785.3-201ENST00000476607 425 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC084198.1-201ENST00000477747 402 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC012170.1-201ENST00000495139 359 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 RNU6-943P-201ENST00000516960 98 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC106785.1-201ENST00000565935 262 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 KLKP1-201ENST00000595979 403 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC28Q86X40 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 MIR6500-201ENST00000622700 86 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 MIR7153-201ENST00000637758 57 ntBASIC3.35□□□□□ -1.87
LRRC28Q86X40 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC28Q86X40 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRRC28Q86X40 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
LRRC28Q86X40 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC28Q86X40 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC28Q86X40 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC28Q86X40 OR10AB1P-202ENST00000641219 1686 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LRRC28Q86X40 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 Y_RNA.126-201ENST00000363382 111 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 U1.1-201ENST00000384101 164 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 PTMAP5-201ENST00000393073 333 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 AL590704.1-201ENST00000402856 794 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 HIGD1AP12-201ENST00000427832 281 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 ARF4P2-201ENST00000430209 526 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 OR52Y1P-201ENST00000452418 828 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 AC020898.1-201ENST00000474167 787 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 NPM1P17-201ENST00000479221 602 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 TMED11P-201ENST00000479478 690 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 VN1R105P-201ENST00000486595 910 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 AP001086.1-201ENST00000494882 321 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 AC026402.1-201ENST00000513642 170 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 MTND5P21-201ENST00000531961 522 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 AC120057.2-201ENST00000571520 271 ntBASIC3.34□□□□□ -1.87
LRRC28Q86X40 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.34□□□□□ -1.87
LRRC28Q86X40 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms