Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RN7SKP100-201ENST00000411258 284 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AL390023.1-201ENST00000428836 262 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC090018.1-201ENST00000434369 367 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 MTND4P6-201ENST00000438297 472 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 PPIAP17-201ENST00000438507 471 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 ELOCP30-201ENST00000447108 299 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 NPM1P39-201ENST00000449818 867 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AL354710.1-201ENST00000453641 246 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 RPL37P3-201ENST00000456825 293 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC022795.1-201ENST00000473808 480 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 GAPDHP36-201ENST00000480688 918 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 RPL7P41-201ENST00000485823 957 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC098976.1-201ENST00000513014 541 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 TCP11X3P-202ENST00000514289 1254 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AF279873.1-201ENST00000523393 313 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 GTF2IP8-201ENST00000560687 584 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC233280.2-201ENST00000603917 1070 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC091488.1-201ENST00000604239 660 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC069209.1-201ENST00000619282 651 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC015804.1-201ENST00000622935 435 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 CR392039.4-201ENST00000624968 501 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AL596275.2-204ENST00000641628 552 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AL596275.2-206ENST00000641957 626 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AL672167.1-204ENST00000641875 3017 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC005332.5-201ENST00000591222 2919 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 IL6STP1-201ENST00000346911 1020 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 RNU5D-1-201ENST00000363299 116 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 TAF9BP1-201ENST00000396646 746 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 RNU6-648P-201ENST00000410190 107 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AL035407.1-201ENST00000429211 571 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 ELOCP10-201ENST00000440624 327 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 NOP56P2-201ENST00000447491 769 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC090804.1-201ENST00000448870 490 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 TCEA1P1-201ENST00000449716 880 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 UBA52P3-201ENST00000491303 382 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 WBP1LP4-201ENST00000505043 344 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC111000.3-201ENST00000508057 576 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC008885.2-201ENST00000509506 930 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC010587.2-201ENST00000511727 448 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 OR5BM1P-201ENST00000512021 366 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 RN7SKP276-201ENST00000516242 268 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 RNU6-1225P-201ENST00000516336 65 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 RNU6-759P-201ENST00000516740 103 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 RNA5SP135-201ENST00000517019 125 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 HIGD1AP6-201ENST00000521833 279 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 MTCO1P49-201ENST00000523429 802 ntBASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
SLC44A4Q53GD3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms