Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 MEMO1P5-201ENST00000604810 406 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 HSPE1P14-201ENST00000605812 302 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC092106.3-201ENST00000611308 722 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC005332.6-201ENST00000613178 446 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC073348.1-201ENST00000623002 331 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC005086.4-201ENST00000623065 213 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AP000843.1-201ENST00000624880 701 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 FAM157B-203ENST00000639350 358 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC38Q502W7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.96□□□□□ -1.62
CCDC38Q502W7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC38Q502W7 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC38Q502W7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC109315.1-201ENST00000584143 1347 ntBASIC4.96□□□□□ -1.62
CCDC38Q502W7 AC008758.3-201ENST00000507003 1829 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 SAGE4P-201ENST00000442271 3381 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC38Q502W7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC38Q502W7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 Y_RNA.192-201ENST00000363977 102 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 RNU6-1243P-201ENST00000364028 107 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 RNU6-921P-201ENST00000384361 107 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 SNORA70-201ENST00000384436 135 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 SPTLC1P2-201ENST00000407089 121 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 TBCAP2-201ENST00000416175 326 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 RPS15AP40-201ENST00000419621 391 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC096632.1-201ENST00000427395 310 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC008065.1-201ENST00000428525 348 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 COX7BP2-201ENST00000437976 242 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC004938.1-201ENST00000438468 308 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 AL357520.1-201ENST00000441557 453 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC000111.2-201ENST00000448200 210 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC133473.1-201ENST00000455173 299 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 RN7SL319P-201ENST00000480656 221 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 KLRA1P-201ENST00000503499 986 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC098862.1-201ENST00000504991 413 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 HAUS8P1-201ENST00000549005 542 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC38Q502W7 NBEAP1-201ENST00000554452 979 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 SNORA74C-1-201ENST00000580726 201 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC097478.2-201ENST00000610572 514 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC009159.2-201ENST00000617603 606 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 AL022401.1-201ENST00000619498 108 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC000123.2-201ENST00000623124 461 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CCDC38Q502W7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CCDC38Q502W7 AC017104.4-201ENST00000636283 1592 ntBASIC4.95□□□□□ -1.62
CCDC38Q502W7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 AC117529.2-201ENST00000512159 2068 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CCDC38Q502W7 RNU5D-1-201ENST00000363299 116 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 MIR649-201ENST00000384843 97 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CCDC38Q502W7 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 RNA5SP80-201ENST00000410475 111 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 RNU2-42P-201ENST00000410697 113 ntBASIC4.94□□□□□ -1.62
CCDC38Q502W7 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms