Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 H2AFZP6-201ENST00000444403 394 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AL031584.1-201ENST00000447169 754 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 RPS15AP1-201ENST00000457423 391 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 RPS20P21-201ENST00000466859 343 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 RN7SL459P-201ENST00000481078 302 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AC012170.1-201ENST00000495139 359 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AC011352.3-201ENST00000505162 593 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 RNU6-709P-201ENST00000517257 104 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 SOD1P3-201ENST00000518682 454 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 EDDM3DP-201ENST00000554692 434 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 MIR4330-201ENST00000579077 105 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AC011453.2-201ENST00000603737 729 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 VN1R7P-201ENST00000619242 903 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AC019206.1-201ENST00000621938 425 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AL512506.2-201ENST00000624472 458 ntBASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
LONRF3Q496Y0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
LONRF3Q496Y0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.46□□□□□ -1.53
LONRF3Q496Y0 AC012618.3-205ENST00000637896 1496 ntBASIC5.46□□□□□ -1.53
LONRF3Q496Y0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
LONRF3Q496Y0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
LONRF3Q496Y0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 DHX9P1-201ENST00000436565 3076 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 Z75741.2-201ENST00000417272 1167 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 RPS15AP40-201ENST00000419621 391 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC004074.1-201ENST00000421810 1063 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC234779.1-201ENST00000425910 285 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AL513175.1-201ENST00000431492 780 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC010881.1-201ENST00000433830 235 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 RPL7P11-201ENST00000437586 658 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC004938.1-201ENST00000438468 308 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 PPIAP17-201ENST00000438507 471 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 EXTL2P1-201ENST00000446218 416 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 RPL7P59-201ENST00000447700 943 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 ART2BP-201ENST00000453501 499 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 snoU13.7-201ENST00000459220 104 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC006463.2-201ENST00000473326 348 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 RN7SL558P-201ENST00000497468 299 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC023632.1-201ENST00000518463 375 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AP001207.1-201ENST00000524051 481 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC125611.1-201ENST00000549563 229 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 EIF5A2P1-201ENST00000564027 460 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 SNORA74C-1-201ENST00000580726 201 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC022069.1-201ENST00000582910 658 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AP001269.3-201ENST00000588718 329 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 VN1R83P-201ENST00000595685 445 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC083899.3-201ENST00000603413 594 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 LLPHP1-201ENST00000603571 367 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AL158163.2-201ENST00000619110 700 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC109454.4-201ENST00000623411 649 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 AC104454.1-201ENST00000421341 1401 ntBASIC5.46□□□□□ -1.54
LONRF3Q496Y0 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
LONRF3Q496Y0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LONRF3Q496Y0 AP000580.1-201ENST00000404439 358 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms