Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 HMGB3P21-201ENST00000452483 547 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 MTND2P28-201ENST00000457540 1044 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 MTND4LP3-201ENST00000468320 276 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 HMGN2P25-201ENST00000486956 268 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC008802.1-201ENST00000519121 791 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 PCNPP1-201ENST00000552501 511 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 HSPE1P3-201ENST00000559254 309 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC135507.1-201ENST00000607214 561 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC093799.2-201ENST00000610062 578 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC244107.2-201ENST00000611773 76 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC018816.2-201ENST00000621460 353 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 Z69908.1-201ENST00000622603 247 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 OR4G11P-202ENST00000642116 1414 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AL450345.1-202ENST00000605741 3881 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC025574.1-201ENST00000554784 1653 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 Y_RNA.201-201ENST00000364052 96 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 RNU6-1226P-201ENST00000384317 107 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 DBIP1-201ENST00000401435 260 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC073136.2-201ENST00000417282 849 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC083875.1-201ENST00000419509 405 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 GSTA7P-201ENST00000438425 448 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 MTND1P30-201ENST00000441241 901 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC012512.1-201ENST00000446594 718 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 RPL7L1P1-201ENST00000448259 785 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 RPS29P22-201ENST00000472363 168 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC090013.1-201ENST00000485147 480 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 MTCYBP37-201ENST00000510642 1133 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC006499.2-201ENST00000513470 337 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 RN7SL356P-201ENST00000582228 248 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 WISP1-OT1-201ENST00000602893 642 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 MIR7844-201ENST00000616161 122 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AC073869.10-201ENST00000642016 354 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 INTS6P1-201ENST00000504674 2530 ntBASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CCDC144BQ3MJ40 AL592148.3-201ENST00000608771 2646 ntBASIC5.97□□□□□ -1.45
CCDC144BQ3MJ40 THAP12P4-201ENST00000528321 2266 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms