Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.51□□□□□ -1.69
GABPAQ06546 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.51□□□□□ -1.69
GABPAQ06546 AC024341.1-201ENST00000526444 1552 ntBASIC4.51□□□□□ -1.69
GABPAQ06546 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
GABPAQ06546 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GABPAQ06546 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
GABPAQ06546 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.51□□□□□ -1.69
GABPAQ06546 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
GABPAQ06546 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABPAQ06546 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
GABPAQ06546 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GABPAQ06546 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
GABPAQ06546 AC024560.2-201ENST00000507981 1497 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GABPAQ06546 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GABPAQ06546 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GABPAQ06546 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.5□□□□□ -1.69
GABPAQ06546 RAD1P1-201ENST00000231383 813 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.5□□□□□ -1.69
GABPAQ06546 RNA5SP52-201ENST00000362448 134 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 RNA5SP119-201ENST00000362715 117 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 SNORD3H-201ENST00000384486 214 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 MIR200C-201ENST00000384980 68 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.5□□□□□ -1.69
GABPAQ06546 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.5□□□□□ -1.69
GABPAQ06546 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.5□□□□□ -1.69
GABPAQ06546 RNA5SP498-201ENST00000411342 120 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 ARL2BPP3-201ENST00000421226 480 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 EIF4EP1-201ENST00000422311 642 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 AL390879.2-203ENST00000426943 1121 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 AC091286.1-201ENST00000431233 461 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 AL353718.1-201ENST00000451028 517 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 AC243772.1-201ENST00000451620 410 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 RPS6P2-201ENST00000454208 705 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 MTND2P30-201ENST00000456663 382 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 RPL7P15-201ENST00000461190 712 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.5□□□□□ -1.69
GABPAQ06546 AC107398.1-201ENST00000486904 505 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.5□□□□□ -1.69
GABPAQ06546 RAC1P2-201ENST00000511164 579 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.5□□□□□ -1.69
GABPAQ06546 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.5□□□□□ -1.69
GABPAQ06546 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.5□□□□□ -1.69
GABPAQ06546 AC008802.1-201ENST00000519121 791 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.5□□□□□ -1.69
GABPAQ06546 AC022882.1-201ENST00000532142 501 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.5□□□□□ -1.69
GABPAQ06546 AC244505.7-201ENST00000599675 272 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GABPAQ06546 SNORA62.6-201ENST00000606322 83 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 AC004775.1-201ENST00000607389 753 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.5□□□□□ -1.69
GABPAQ06546 AP002967.1-201ENST00000624203 539 ntBASIC4.5□□□□□ -1.69
GABPAQ06546 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
GABPAQ06546 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
GABPAQ06546 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GABPAQ06546 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.49□□□□□ -1.69
GABPAQ06546 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GABPAQ06546 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
GABPAQ06546 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.49□□□□□ -1.69
GABPAQ06546 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GABPAQ06546 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.49□□□□□ -1.69
GABPAQ06546 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.49□□□□□ -1.69
GABPAQ06546 AC107027.3-201ENST00000565095 3473 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
GABPAQ06546 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GABPAQ06546 RNU6-225P-201ENST00000384613 103 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
GABPAQ06546 RPL7P60-201ENST00000397636 735 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 RNA5SP44-201ENST00000410446 133 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 RNU2-72P-201ENST00000411175 163 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GABPAQ06546 AL160175.1-201ENST00000428124 247 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 RPL17P35-201ENST00000432217 549 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 SNORA71B-202ENST00000439232 272 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 MTND6P18-201ENST00000439477 513 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
GABPAQ06546 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.49□□□□□ -1.69
GABPAQ06546 RNU7-27P-201ENST00000459281 62 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 AC022034.3-201ENST00000471393 478 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 SYT14P1-201ENST00000481459 721 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.49□□□□□ -1.69
GABPAQ06546 RNA5SP164-201ENST00000516533 110 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 UBTFL9-201ENST00000534504 1148 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.49□□□□□ -1.69
GABPAQ06546 AC233280.2-201ENST00000603917 1070 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 AL391497.1-201ENST00000608671 547 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 AP004607.9-201ENST00000618202 316 ntBASIC4.49□□□□□ -1.69
GABPAQ06546 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.49□□□□□ -1.69
GABPAQ06546 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
GABPAQ06546 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
GABPAQ06546 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
GABPAQ06546 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.49□□□□□ -1.69
GABPAQ06546 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.48□□□□□ -1.69
GABPAQ06546 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GABPAQ06546 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.48□□□□□ -1.69
GABPAQ06546 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.48□□□□□ -1.69
GABPAQ06546 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GABPAQ06546 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms