Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.84□□□□□ -1.63
E2F1Q01094 ENPP7P11-201ENST00000505915 627 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 MTND4P2-201ENST00000507767 1203 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.84□□□□□ -1.63
E2F1Q01094 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.84□□□□□ -1.63
E2F1Q01094 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.84□□□□□ -1.63
E2F1Q01094 RN7SKP31-201ENST00000516354 278 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 RNA5SP135-201ENST00000517019 125 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 RN7SKP92-201ENST00000517266 244 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 NDUFA5P2-201ENST00000519723 344 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
E2F1Q01094 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.84□□□□□ -1.63
E2F1Q01094 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.84□□□□□ -1.63
E2F1Q01094 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.84□□□□□ -1.63
E2F1Q01094 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.84□□□□□ -1.63
E2F1Q01094 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
E2F1Q01094 PARP1P2-201ENST00000556806 195 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 GTF2IP8-201ENST00000560687 584 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 AC122134.1-201ENST00000565664 1104 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.84□□□□□ -1.63
E2F1Q01094 AC011260.1-201ENST00000578420 472 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 AC233702.9-201ENST00000581528 203 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 MIR4472-2-201ENST00000582069 67 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 PRPF19P1-201ENST00000584766 898 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 RPL26P30-202ENST00000602923 645 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 NTAN1P1-201ENST00000603150 646 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 RN7SKP299-201ENST00000606679 301 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.84□□□□□ -1.63
E2F1Q01094 AC073348.1-201ENST00000623002 331 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 AC015726.3-201ENST00000624501 418 ntBASIC4.84□□□□□ -1.63
E2F1Q01094 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
E2F1Q01094 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.84□□□□□ -1.64
E2F1Q01094 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
E2F1Q01094 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
E2F1Q01094 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
E2F1Q01094 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
E2F1Q01094 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
E2F1Q01094 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
E2F1Q01094 ASNSP1-204ENST00000641977 1664 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
E2F1Q01094 NCLP2-201ENST00000416078 1462 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.83□□□□□ -1.64
E2F1Q01094 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
E2F1Q01094 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
E2F1Q01094 MTND4P34-201ENST00000572715 1371 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
E2F1Q01094 RNU5D-1-201ENST00000363299 116 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 RNA5SP223-201ENST00000365174 120 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
E2F1Q01094 RNU6-920P-201ENST00000410926 92 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 RNU2-6P-201ENST00000411404 190 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 CTSL3P-202ENST00000412179 788 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.83□□□□□ -1.64
E2F1Q01094 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.83□□□□□ -1.64
E2F1Q01094 AC073069.1-201ENST00000428657 441 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AC009238.2-201ENST00000431026 355 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.83□□□□□ -1.64
E2F1Q01094 AL050321.1-201ENST00000432363 400 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AL590103.1-201ENST00000434488 307 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 MUPP-201ENST00000438111 566 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 MTND1P34-201ENST00000438556 671 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.83□□□□□ -1.64
E2F1Q01094 RPL12P26-201ENST00000452430 487 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AC245028.2-201ENST00000458673 253 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.83□□□□□ -1.64
E2F1Q01094 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
E2F1Q01094 NCOR1P1-202ENST00000486162 291 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 RPS27P23-201ENST00000487608 251 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AL049874.2-201ENST00000492636 288 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.83□□□□□ -1.64
E2F1Q01094 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
E2F1Q01094 MYL12BP2-201ENST00000503948 512 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.83□□□□□ -1.64
E2F1Q01094 HMGB3P13-201ENST00000511263 607 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 TCP11X3P-202ENST00000514289 1254 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.83□□□□□ -1.64
E2F1Q01094 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
E2F1Q01094 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.83□□□□□ -1.64
E2F1Q01094 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.83□□□□□ -1.64
E2F1Q01094 AC007954.1-201ENST00000554198 494 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.83□□□□□ -1.64
E2F1Q01094 AC040958.1-201ENST00000561102 201 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.83□□□□□ -1.64
E2F1Q01094 WISP1-OT1-201ENST00000602893 642 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AL137072.1-201ENST00000603444 466 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AC020910.3-201ENST00000603701 874 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
E2F1Q01094 AC008083.4-201ENST00000615076 444 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
E2F1Q01094 AL136981.2-201ENST00000617319 734 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.83□□□□□ -1.64
E2F1Q01094 MIR7703-201ENST00000620784 77 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 AC068792.1-201ENST00000621354 417 ntBASIC4.83□□□□□ -1.64
E2F1Q01094 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
E2F1Q01094 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
E2F1Q01094 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
E2F1Q01094 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
E2F1Q01094 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.83□□□□□ -1.64
E2F1Q01094 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
E2F1Q01094 AC025574.1-201ENST00000554784 1653 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms