Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 RNA5SP146-201ENST00000410743 123 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.48□□□□□ -1.69
CCNA1P78396 RPS29P4-201ENST00000414733 161 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.48□□□□□ -1.69
CCNA1P78396 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.48□□□□□ -1.69
CCNA1P78396 AL031663.1-201ENST00000437445 219 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.48□□□□□ -1.69
CCNA1P78396 AC023512.1-201ENST00000444513 499 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 TPMTP4-201ENST00000450749 678 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.48□□□□□ -1.69
CCNA1P78396 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.48□□□□□ -1.69
CCNA1P78396 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.48□□□□□ -1.69
CCNA1P78396 AC147055.1-201ENST00000509261 750 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.48□□□□□ -1.69
CCNA1P78396 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.48□□□□□ -1.69
CCNA1P78396 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.48□□□□□ -1.69
CCNA1P78396 AC022968.1-201ENST00000567372 442 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 AC079171.1-201ENST00000568788 914 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 RN7SL339P-201ENST00000580597 296 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.48□□□□□ -1.69
CCNA1P78396 AC104662.1-201ENST00000604448 511 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 AC012468.1-201ENST00000604888 430 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 AC092354.2-201ENST00000607786 514 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 AC124312.6-202ENST00000623624 418 ntBASIC4.48□□□□□ -1.69
CCNA1P78396 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.48□□□□□ -1.69
CCNA1P78396 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCNA1P78396 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCNA1P78396 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCNA1P78396 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCNA1P78396 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCNA1P78396 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCNA1P78396 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.48□□□□□ -1.69
CCNA1P78396 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
CCNA1P78396 SYT14P1-202ENST00000600441 1448 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCNA1P78396 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.47□□□□□ -1.69
CCNA1P78396 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.47□□□□□ -1.69
CCNA1P78396 AC093311.1-201ENST00000506586 2021 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 RNA5SP72-201ENST00000364442 117 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 VN1R8P-201ENST00000407739 893 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 SNORA3C-201ENST00000408792 125 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 SYF2P2-201ENST00000417620 583 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 AC008280.1-201ENST00000418851 412 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 AL035423.1-201ENST00000420331 213 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 AC110768.1-201ENST00000509222 400 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.47□□□□□ -1.69
CCNA1P78396 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.47□□□□□ -1.69
CCNA1P78396 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.47□□□□□ -1.69
CCNA1P78396 AC087369.1-201ENST00000520775 996 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCNA1P78396 OR4A12P-201ENST00000530847 918 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.47□□□□□ -1.69
CCNA1P78396 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.47□□□□□ -1.69
CCNA1P78396 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.47□□□□□ -1.69
CCNA1P78396 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.47□□□□□ -1.69
CCNA1P78396 MIR5187-201ENST00000583479 76 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.47□□□□□ -1.69
CCNA1P78396 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.47□□□□□ -1.69
CCNA1P78396 U3.45-201ENST00000607547 219 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.47□□□□□ -1.69
CCNA1P78396 AL159169.3-201ENST00000608871 561 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.47□□□□□ -1.69
CCNA1P78396 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCNA1P78396 AC073530.2-201ENST00000623987 261 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.47□□□□□ -1.69
CCNA1P78396 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.47□□□□□ -1.69
CCNA1P78396 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.47□□□□□ -1.69
CCNA1P78396 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCNA1P78396 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCNA1P78396 AC105074.1-201ENST00000623380 3095 ntBASIC4.47□□□□□ -1.69
CCNA1P78396 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.47□□□□□ -1.69
CCNA1P78396 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
CCNA1P78396 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCNA1P78396 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCNA1P78396 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CCNA1P78396 U3.15-201ENST00000365398 212 ntBASIC4.46□□□□□ -1.7
CCNA1P78396 MIR483-201ENST00000385070 76 ntBASIC4.46□□□□□ -1.7
CCNA1P78396 ATP5F1P4-201ENST00000397288 746 ntBASIC4.46□□□□□ -1.7
CCNA1P78396 AL603766.1-201ENST00000407763 664 ntBASIC4.46□□□□□ -1.7
CCNA1P78396 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.46□□□□□ -1.7
CCNA1P78396 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.46□□□□□ -1.7
CCNA1P78396 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCNA1P78396 HSPD1P21-201ENST00000436541 245 ntBASIC4.46□□□□□ -1.7
CCNA1P78396 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.46□□□□□ -1.7
CCNA1P78396 AC018797.3-201ENST00000513388 1241 ntBASIC4.46□□□□□ -1.7
CCNA1P78396 RNU6-1308P-201ENST00000516817 103 ntBASIC4.46□□□□□ -1.7
CCNA1P78396 SCARNA14-201ENST00000516903 136 ntBASIC4.46□□□□□ -1.7
CCNA1P78396 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCNA1P78396 AC092868.3-201ENST00000560515 784 ntBASIC4.46□□□□□ -1.7
CCNA1P78396 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.46□□□□□ -1.7
CCNA1P78396 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.46□□□□□ -1.7
CCNA1P78396 AC083899.3-201ENST00000603413 594 ntBASIC4.46□□□□□ -1.7
CCNA1P78396 AC023509.5-201ENST00000617434 807 ntBASIC4.46□□□□□ -1.7
CCNA1P78396 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCNA1P78396 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CCNA1P78396 AC012020.1-201ENST00000624541 1728 ntBASIC4.46□□□□□ -1.7
CCNA1P78396 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCNA1P78396 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CCNA1P78396 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms