Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.4□□□□□ -1.87
LSM6P62312 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.4□□□□□ -1.87
LSM6P62312 BMS1P7-201ENST00000602440 1052 ntBASIC3.4□□□□□ -1.87
LSM6P62312 AL592436.1-201ENST00000605135 558 ntBASIC3.4□□□□□ -1.87
LSM6P62312 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.4□□□□□ -1.87
LSM6P62312 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
LSM6P62312 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LSM6P62312 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.4□□□□□ -1.87
LSM6P62312 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
LSM6P62312 GABPAP-201ENST00000419271 1356 ntBASIC3.39□□□□□ -1.87
LSM6P62312 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.39□□□□□ -1.87
LSM6P62312 LINC00561-201ENST00000565815 2738 ntBASIC3.39□□□□□ -1.87
LSM6P62312 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LSM6P62312 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LSM6P62312 RPL32P3-201ENST00000359025 275 ntBASIC3.39□□□□□ -1.87
LSM6P62312 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM6P62312 MIR141-201ENST00000384975 95 ntBASIC3.39□□□□□ -1.87
LSM6P62312 HMGN2P8-201ENST00000391458 268 ntBASIC3.39□□□□□ -1.87
LSM6P62312 AL049693.1-201ENST00000402760 611 ntBASIC3.39□□□□□ -1.87
LSM6P62312 HMGB1P13-201ENST00000406019 642 ntBASIC3.39□□□□□ -1.87
LSM6P62312 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.39□□□□□ -1.87
LSM6P62312 RNA5SP498-201ENST00000411342 120 ntBASIC3.39□□□□□ -1.87
LSM6P62312 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM6P62312 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LSM6P62312 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM6P62312 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.39□□□□□ -1.87
LSM6P62312 CFTRP1-201ENST00000456646 183 ntBASIC3.39□□□□□ -1.87
LSM6P62312 SNRPGP3-201ENST00000469405 227 ntBASIC3.39□□□□□ -1.87
LSM6P62312 AC084198.1-201ENST00000477747 402 ntBASIC3.39□□□□□ -1.87
LSM6P62312 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM6P62312 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM6P62312 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.39□□□□□ -1.87
LSM6P62312 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM6P62312 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.39□□□□□ -1.87
LSM6P62312 OR4A2P-201ENST00000527276 913 ntBASIC3.39□□□□□ -1.87
LSM6P62312 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM6P62312 AC092747.2-201ENST00000545069 983 ntBASIC3.39□□□□□ -1.87
LSM6P62312 OR4U1P-201ENST00000554958 912 ntBASIC3.39□□□□□ -1.87
LSM6P62312 AC106785.3-201ENST00000564064 847 ntBASIC3.39□□□□□ -1.87
LSM6P62312 ZNF192P1-203ENST00000565888 810 ntBASIC3.39□□□□□ -1.87
LSM6P62312 MIR3186-201ENST00000577404 85 ntBASIC3.39□□□□□ -1.87
LSM6P62312 SS18L2P2-201ENST00000583960 235 ntBASIC3.39□□□□□ -1.87
LSM6P62312 AL137849.1-201ENST00000604767 169 ntBASIC3.39□□□□□ -1.87
LSM6P62312 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.39□□□□□ -1.87
LSM6P62312 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.39□□□□□ -1.87
LSM6P62312 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.39□□□□□ -1.87
LSM6P62312 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LSM6P62312 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.39□□□□□ -1.87
LSM6P62312 MIR6758-201ENST00000620653 63 ntBASIC3.39□□□□□ -1.87
LSM6P62312 AF001550.2-201ENST00000636643 217 ntBASIC3.39□□□□□ -1.87
LSM6P62312 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LSM6P62312 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
LSM6P62312 NCAPGP1-201ENST00000505112 1814 ntBASIC3.39□□□□□ -1.87
LSM6P62312 AP001148.1-201ENST00000624124 2359 ntBASIC3.39□□□□□ -1.87
LSM6P62312 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LSM6P62312 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LSM6P62312 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LSM6P62312 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LSM6P62312 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LSM6P62312 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM6P62312 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LSM6P62312 ZNF33CP-201ENST00000432492 2030 ntBASIC3.38□□□□□ -1.87
LSM6P62312 CCNB2P1-201ENST00000399411 1150 ntBASIC3.38□□□□□ -1.87
LSM6P62312 RPL30P2-201ENST00000414021 291 ntBASIC3.38□□□□□ -1.87
LSM6P62312 IFNNP1-201ENST00000429219 553 ntBASIC3.38□□□□□ -1.87
LSM6P62312 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.38□□□□□ -1.87
LSM6P62312 HSFY6P-201ENST00000445573 403 ntBASIC3.38□□□□□ -1.87
LSM6P62312 AC010307.1-201ENST00000467206 836 ntBASIC3.38□□□□□ -1.87
LSM6P62312 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.38□□□□□ -1.87
LSM6P62312 RN7SKP209-201ENST00000516888 304 ntBASIC3.38□□□□□ -1.87
LSM6P62312 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM6P62312 MTCO2P22-201ENST00000603246 681 ntBASIC3.38□□□□□ -1.87
LSM6P62312 MIR6748-201ENST00000610433 71 ntBASIC3.38□□□□□ -1.87
LSM6P62312 AC092628.2-201ENST00000622492 339 ntBASIC3.38□□□□□ -1.87
LSM6P62312 MIR6500-201ENST00000622700 86 ntBASIC3.38□□□□□ -1.87
LSM6P62312 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LSM6P62312 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM6P62312 MIR4278-201ENST00000636094 69 ntBASIC3.38□□□□□ -1.87
LSM6P62312 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM6P62312 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM6P62312 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.38□□□□□ -1.87
LSM6P62312 AF127577.6-201ENST00000623352 2191 ntBASIC3.38□□□□□ -1.87
LSM6P62312 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LSM6P62312 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LSM6P62312 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM6P62312 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM6P62312 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM6P62312 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
LSM6P62312 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM6P62312 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.37□□□□□ -1.87
LSM6P62312 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
LSM6P62312 AC068538.1-201ENST00000376856 336 ntBASIC3.37□□□□□ -1.87
LSM6P62312 RNU1-13P-201ENST00000384499 162 ntBASIC3.37□□□□□ -1.87
LSM6P62312 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LSM6P62312 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM6P62312 C4BPAP2-201ENST00000428434 478 ntBASIC3.37□□□□□ -1.87
LSM6P62312 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.37□□□□□ -1.87
LSM6P62312 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.37□□□□□ -1.87
LSM6P62312 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.37□□□□□ -1.87
LSM6P62312 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms