Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC008676.3-201ENST00000521237 435 ntBASIC3.8□□□□□ -1.8
CLDN6P56747 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN6P56747 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN6P56747 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN6P56747 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.8□□□□□ -1.8
CLDN6P56747 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN6P56747 AC063950.1-201ENST00000552036 308 ntBASIC3.8□□□□□ -1.8
CLDN6P56747 AC124068.1-201ENST00000563131 678 ntBASIC3.8□□□□□ -1.8
CLDN6P56747 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN6P56747 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN6P56747 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN6P56747 AC011471.1-201ENST00000585766 187 ntBASIC3.8□□□□□ -1.8
CLDN6P56747 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.8□□□□□ -1.8
CLDN6P56747 AC008638.3-201ENST00000603341 463 ntBASIC3.8□□□□□ -1.8
CLDN6P56747 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.8□□□□□ -1.8
CLDN6P56747 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CLDN6P56747 ERCC6-202ENST00000374127 1782 ntBASIC3.8□□□□□ -1.8
CLDN6P56747 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN6P56747 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CLDN6P56747 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.8□□□□□ -1.8
CLDN6P56747 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLDN6P56747 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
CLDN6P56747 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN6P56747 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CLDN6P56747 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN6P56747 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN6P56747 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CLDN6P56747 MIR93-201ENST00000385024 80 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 MIR513A2-201ENST00000385249 127 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 PTMAP5-201ENST00000393073 333 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN6P56747 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.79□□□□□ -1.8
CLDN6P56747 AC013404.1-201ENST00000413068 249 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 AC092647.1-201ENST00000420654 287 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN6P56747 MTCYBP12-201ENST00000440559 1134 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN6P56747 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN6P56747 SNORA59A-201ENST00000459326 152 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 UBE2CP3-201ENST00000502715 450 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN6P56747 BNIP3P41-201ENST00000503774 571 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.79□□□□□ -1.8
CLDN6P56747 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN6P56747 AC022695.1-201ENST00000522089 237 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN6P56747 YPEL5P3-201ENST00000547227 352 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN6P56747 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN6P56747 AC012417.1-201ENST00000582307 1039 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 MIR4512-201ENST00000583257 77 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN6P56747 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLDN6P56747 AC116563.2-201ENST00000624751 535 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 AP001002.2-201ENST00000625137 386 ntBASIC3.79□□□□□ -1.8
CLDN6P56747 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.79□□□□□ -1.8
CLDN6P56747 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN6P56747 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN6P56747 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CLDN6P56747 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLDN6P56747 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.79□□□□□ -1.8
CLDN6P56747 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN6P56747 AL592182.3-201ENST00000642132 3304 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLDN6P56747 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CLDN6P56747 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLDN6P56747 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN6P56747 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN6P56747 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN6P56747 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN6P56747 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN6P56747 RNU4-23P-201ENST00000362839 140 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 SNORD74.4-201ENST00000364129 80 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 RNU6-564P-201ENST00000410983 104 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 RNA5SP498-201ENST00000411342 120 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 Z92545.1-201ENST00000411782 234 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 KRR1P1-201ENST00000419430 803 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 RBMY1KP-201ENST00000423480 476 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN6P56747 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN6P56747 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.78□□□□□ -1.8
CLDN6P56747 AL451050.1-201ENST00000450126 415 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 RPS4XP10-201ENST00000465034 731 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 AC006511.1-201ENST00000470614 315 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN6P56747 RPS3AP6-201ENST00000484430 795 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN6P56747 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.78□□□□□ -1.8
CLDN6P56747 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN6P56747 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.78□□□□□ -1.8
CLDN6P56747 AC106782.4-201ENST00000568264 210 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 U3.45-201ENST00000607547 219 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 AL158196.1-201ENST00000616786 434 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 AL391597.1-201ENST00000618707 694 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 MIR6715B-201ENST00000637172 77 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 NOL8P1-201ENST00000508336 3529 ntBASIC3.78□□□□□ -1.8
CLDN6P56747 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLDN6P56747 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.78□□□□□ -1.8
CLDN6P56747 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms