Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PEX3P56589 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PEX3P56589 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.29□□□□□ -1.72
PEX3P56589 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.28□□□□□ -1.72
PEX3P56589 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PEX3P56589 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PEX3P56589 AC090971.4-201ENST00000560291 1800 ntBASIC4.28□□□□□ -1.72
PEX3P56589 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PEX3P56589 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PEX3P56589 OR11H5P-202ENST00000641612 1325 ntBASIC4.28□□□□□ -1.72
PEX3P56589 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PEX3P56589 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PEX3P56589 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PEX3P56589 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PEX3P56589 MIR30B-201ENST00000384850 88 ntBASIC4.28□□□□□ -1.72
PEX3P56589 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.28□□□□□ -1.72
PEX3P56589 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PEX3P56589 AL590609.2-201ENST00000421430 368 ntBASIC4.28□□□□□ -1.72
PEX3P56589 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.28□□□□□ -1.72
PEX3P56589 Z74696.2-201ENST00000436514 498 ntBASIC4.28□□□□□ -1.72
PEX3P56589 MTCYBP12-201ENST00000440559 1134 ntBASIC4.28□□□□□ -1.72
PEX3P56589 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.28□□□□□ -1.72
PEX3P56589 RNFT1P2-201ENST00000443064 757 ntBASIC4.28□□□□□ -1.72
PEX3P56589 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PEX3P56589 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.28□□□□□ -1.72
PEX3P56589 RN7SL132P-201ENST00000478131 296 ntBASIC4.28□□□□□ -1.72
PEX3P56589 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
PEX3P56589 AC026726.1-201ENST00000512859 601 ntBASIC4.28□□□□□ -1.72
PEX3P56589 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.28□□□□□ -1.72
PEX3P56589 HMGN1P15-201ENST00000513870 295 ntBASIC4.28□□□□□ -1.72
PEX3P56589 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.28□□□□□ -1.72
PEX3P56589 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.28□□□□□ -1.72
PEX3P56589 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.28□□□□□ -1.72
PEX3P56589 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PEX3P56589 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.28□□□□□ -1.72
PEX3P56589 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.28□□□□□ -1.72
PEX3P56589 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.28□□□□□ -1.72
PEX3P56589 AC092953.2-201ENST00000608000 699 ntBASIC4.28□□□□□ -1.72
PEX3P56589 AC016542.1-201ENST00000608259 493 ntBASIC4.28□□□□□ -1.72
PEX3P56589 AC084824.5-201ENST00000612009 413 ntBASIC4.28□□□□□ -1.72
PEX3P56589 AC099669.2-201ENST00000616549 437 ntBASIC4.28□□□□□ -1.72
PEX3P56589 AC006249.1-201ENST00000621223 471 ntBASIC4.28□□□□□ -1.72
PEX3P56589 AL138960.2-201ENST00000625145 535 ntBASIC4.28□□□□□ -1.72
PEX3P56589 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PEX3P56589 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PEX3P56589 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PEX3P56589 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PEX3P56589 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PEX3P56589 HSPA8P17-201ENST00000427029 1382 ntBASIC4.27□□□□□ -1.73
PEX3P56589 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PEX3P56589 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PEX3P56589 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PEX3P56589 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PEX3P56589 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PEX3P56589 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.27□□□□□ -1.73
PEX3P56589 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.27□□□□□ -1.73
PEX3P56589 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PEX3P56589 AL136131.1-201ENST00000406079 803 ntBASIC4.27□□□□□ -1.73
PEX3P56589 AC010385.1-201ENST00000412374 256 ntBASIC4.27□□□□□ -1.73
PEX3P56589 AL158825.1-201ENST00000414735 521 ntBASIC4.27□□□□□ -1.73
PEX3P56589 RPL17P36-201ENST00000420302 549 ntBASIC4.27□□□□□ -1.73
PEX3P56589 AL121882.1-201ENST00000422893 417 ntBASIC4.27□□□□□ -1.73
PEX3P56589 UBE2D3P3-201ENST00000426992 425 ntBASIC4.27□□□□□ -1.73
PEX3P56589 AL160175.1-201ENST00000428124 247 ntBASIC4.27□□□□□ -1.73
PEX3P56589 AC096638.2-201ENST00000434965 711 ntBASIC4.27□□□□□ -1.73
PEX3P56589 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.27□□□□□ -1.73
PEX3P56589 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.27□□□□□ -1.73
PEX3P56589 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.27□□□□□ -1.73
PEX3P56589 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.27□□□□□ -1.73
PEX3P56589 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PEX3P56589 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.27□□□□□ -1.73
PEX3P56589 NPM1P35-201ENST00000533043 868 ntBASIC4.27□□□□□ -1.73
PEX3P56589 AC092451.2-201ENST00000538746 658 ntBASIC4.27□□□□□ -1.73
PEX3P56589 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.27□□□□□ -1.73
PEX3P56589 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.27□□□□□ -1.73
PEX3P56589 HSPE1P5-201ENST00000561489 272 ntBASIC4.27□□□□□ -1.73
PEX3P56589 MIR5685-201ENST00000579080 79 ntBASIC4.27□□□□□ -1.73
PEX3P56589 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
PEX3P56589 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.27□□□□□ -1.73
PEX3P56589 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PEX3P56589 AC080188.3-201ENST00000624842 748 ntBASIC4.27□□□□□ -1.73
PEX3P56589 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.27□□□□□ -1.73
PEX3P56589 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
PEX3P56589 AF001550.2-201ENST00000636643 217 ntBASIC4.27□□□□□ -1.73
PEX3P56589 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PEX3P56589 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PEX3P56589 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PEX3P56589 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PEX3P56589 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.26□□□□□ -1.73
PEX3P56589 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.26□□□□□ -1.73
PEX3P56589 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PEX3P56589 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.26□□□□□ -1.73
PEX3P56589 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.26□□□□□ -1.73
PEX3P56589 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
PEX3P56589 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.26□□□□□ -1.73
PEX3P56589 RAD1P1-201ENST00000231383 813 ntBASIC4.26□□□□□ -1.73
PEX3P56589 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PEX3P56589 RNU1-64P-201ENST00000365443 163 ntBASIC4.26□□□□□ -1.73
PEX3P56589 RNU6-650P-201ENST00000365658 111 ntBASIC4.26□□□□□ -1.73
PEX3P56589 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms