Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.75□□□□□ -1.65
HDAC4P56524 KRR1P1-201ENST00000419430 803 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC4P56524 AP001324.1-201ENST00000428553 399 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC4P56524 AC004022.1-201ENST00000447766 1066 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 AC073264.2-201ENST00000448886 166 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 IFNWP4-201ENST00000453148 294 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 AC092155.2-201ENST00000454675 477 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 AC091153.1-201ENST00000466297 402 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 AC091959.2-201ENST00000477363 321 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.75□□□□□ -1.65
HDAC4P56524 STMN1P2-201ENST00000508435 439 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.75□□□□□ -1.65
HDAC4P56524 RNU6-311P-201ENST00000516224 102 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 HMGB1P23-201ENST00000518743 568 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC4P56524 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC4P56524 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.75□□□□□ -1.65
HDAC4P56524 RPL21P7-201ENST00000557463 483 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 VN1R88P-201ENST00000596787 292 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.75□□□□□ -1.65
HDAC4P56524 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
HDAC4P56524 AC078899.5-201ENST00000612475 178 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 VN1R74P-201ENST00000613259 503 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.75□□□□□ -1.65
HDAC4P56524 AC134882.1-201ENST00000603738 1676 ntBASIC4.75□□□□□ -1.65
HDAC4P56524 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC4P56524 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC4P56524 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.75□□□□□ -1.65
HDAC4P56524 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC4P56524 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.75□□□□□ -1.65
HDAC4P56524 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC4P56524 AL133412.1-201ENST00000380194 2992 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 AC104446.1-201ENST00000613728 1321 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 AC022031.1-201ENST00000585985 2593 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.74□□□□□ -1.65
HDAC4P56524 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HDAC4P56524 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HDAC4P56524 Z73965.1-201ENST00000623412 2297 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HDAC4P56524 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.74□□□□□ -1.65
HDAC4P56524 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HDAC4P56524 AC079741.1-201ENST00000321498 212 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 SNORD113.2-201ENST00000364166 89 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.74□□□□□ -1.65
HDAC4P56524 RNU6-224P-201ENST00000384055 107 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 MIR513B-201ENST00000385136 84 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 MIR195-201ENST00000385194 87 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 MTCO1P56-201ENST00000401674 224 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HDAC4P56524 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.74□□□□□ -1.65
HDAC4P56524 VDAC1P9-201ENST00000412766 841 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.74□□□□□ -1.65
HDAC4P56524 RAD23BP1-201ENST00000421404 1227 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.74□□□□□ -1.65
HDAC4P56524 ACTR3P2-201ENST00000439585 1257 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 YWHAQP9-201ENST00000445891 512 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.74□□□□□ -1.65
HDAC4P56524 MTND1P31-201ENST00000449206 961 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 ZNF886P-201ENST00000450781 723 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 RN7SL354P-201ENST00000469282 294 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 RN7SL817P-201ENST00000480777 288 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.74□□□□□ -1.65
HDAC4P56524 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.74□□□□□ -1.65
HDAC4P56524 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.74□□□□□ -1.65
HDAC4P56524 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.74□□□□□ -1.65
HDAC4P56524 COX6B1P6-201ENST00000522347 255 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.74□□□□□ -1.65
HDAC4P56524 AP006289.1-201ENST00000538089 277 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 AC011477.5-201ENST00000586571 259 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 HMGB2P1-201ENST00000591146 634 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 AC090181.2-201ENST00000602975 672 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 AL035411.2-201ENST00000604022 421 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.74□□□□□ -1.65
HDAC4P56524 AC109454.4-201ENST00000623411 649 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 AP000676.4-201ENST00000624659 623 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 AC016717.3-201ENST00000624730 554 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.74□□□□□ -1.65
HDAC4P56524 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HDAC4P56524 MFSD8-216ENST00000641147 4009 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HDAC4P56524 AC111188.2-201ENST00000529697 1387 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HDAC4P56524 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HDAC4P56524 AC087190.4-201ENST00000574616 8334 ntBASIC4.74□□□□□ -1.65
HDAC4P56524 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
HDAC4P56524 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HDAC4P56524 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HDAC4P56524 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
HDAC4P56524 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.73□□□□□ -1.65
HDAC4P56524 CPHL1P-201ENST00000461341 3407 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 RNU4-51P-201ENST00000364206 140 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
HDAC4P56524 RNU6-77P-201ENST00000410554 91 ntBASIC4.73□□□□□ -1.65
HDAC4P56524 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.73□□□□□ -1.65
HDAC4P56524 RPL21P108-201ENST00000413857 481 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms