Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ATP5LP5-201ENST00000483050 299 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.29□□□□□ -1.56
GFRA1P56159 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA1P56159 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA1P56159 RNU6-507P-201ENST00000516045 100 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 RN7SKP288-201ENST00000516227 268 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 SNORA70.20-201ENST00000516848 126 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA1P56159 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.29□□□□□ -1.56
GFRA1P56159 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA1P56159 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
GFRA1P56159 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA1P56159 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 AL359212.1-201ENST00000556608 614 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA1P56159 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 RN7SL802P-201ENST00000577858 299 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 H3F3BP2-201ENST00000583907 357 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 BNIP3P9-201ENST00000603714 553 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 AC009318.4-201ENST00000620496 486 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.29□□□□□ -1.56
GFRA1P56159 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.29□□□□□ -1.56
GFRA1P56159 AL592148.3-201ENST00000608771 2646 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
GFRA1P56159 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA1P56159 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA1P56159 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA1P56159 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
GFRA1P56159 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 AL445437.1-201ENST00000623157 3087 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
GFRA1P56159 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA1P56159 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.29□□□□□ -1.56
GFRA1P56159 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.29□□□□□ -1.56
GFRA1P56159 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA1P56159 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.28□□□□□ -1.56
GFRA1P56159 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.28□□□□□ -1.56
GFRA1P56159 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.28□□□□□ -1.56
GFRA1P56159 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
GFRA1P56159 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 RNU6-878P-201ENST00000384578 110 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 AL603766.1-201ENST00000407763 664 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.28□□□□□ -1.56
GFRA1P56159 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA1P56159 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA1P56159 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA1P56159 ZNF90P2-204ENST00000419323 1075 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.28□□□□□ -1.56
GFRA1P56159 AC245054.1-201ENST00000420944 258 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 OR10T1P-201ENST00000424327 947 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.28□□□□□ -1.56
GFRA1P56159 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA1P56159 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
GFRA1P56159 AC098614.3-201ENST00000438957 440 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 USP9YP8-201ENST00000441913 500 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 USP9YP15-201ENST00000442391 422 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.28□□□□□ -1.56
GFRA1P56159 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.28□□□□□ -1.56
GFRA1P56159 RPL31P15-201ENST00000449770 338 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA1P56159 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA1P56159 AL136126.1-201ENST00000473603 402 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 PPIAP19-201ENST00000486414 492 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 NENFP3-201ENST00000503735 313 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 RNU6-1281P-201ENST00000516223 105 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.28□□□□□ -1.56
GFRA1P56159 IGKV3D-34-201ENST00000522638 302 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.28□□□□□ -1.56
GFRA1P56159 AC027026.1-201ENST00000532323 742 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 AC123904.2-201ENST00000548059 300 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.28□□□□□ -1.56
GFRA1P56159 SUB1P2-201ENST00000556401 297 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.28□□□□□ -1.56
GFRA1P56159 AC073091.2-201ENST00000603205 907 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 AC009994.1-201ENST00000606889 253 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 AL138960.1-201ENST00000613838 513 ntBASIC5.28□□□□□ -1.56
GFRA1P56159 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.28□□□□□ -1.56
GFRA1P56159 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
GFRA1P56159 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
GFRA1P56159 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
GFRA1P56159 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
GFRA1P56159 AC011978.2-201ENST00000569835 2054 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms