Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MIR92A2-201ENST00000385299 75 ntBASIC4.37□□□□□ -1.71
CDH12P55289 MIR765-201ENST00000390226 114 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AL133264.1-201ENST00000407157 562 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AL450992.3-201ENST00000413192 568 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AC093162.1-201ENST00000419682 124 ntBASIC4.37□□□□□ -1.71
CDH12P55289 LINC00993-201ENST00000420453 540 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH12P55289 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.37□□□□□ -1.71
CDH12P55289 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH12P55289 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.37□□□□□ -1.71
CDH12P55289 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 PRPF38AP2-201ENST00000438179 851 ntBASIC4.37□□□□□ -1.71
CDH12P55289 ISCA1P2-201ENST00000438679 421 ntBASIC4.37□□□□□ -1.71
CDH12P55289 THAP5P1-201ENST00000439089 262 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH12P55289 AC004865.1-201ENST00000442276 1003 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AC073850.1-201ENST00000449243 255 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AL591363.1-201ENST00000450091 483 ntBASIC4.37□□□□□ -1.71
CDH12P55289 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 AC243772.1-201ENST00000451620 410 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH12P55289 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH12P55289 RN7SL515P-201ENST00000463999 297 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH12P55289 AC006499.3-201ENST00000506077 748 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH12P55289 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH12P55289 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH12P55289 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH12P55289 AC117532.1-201ENST00000514638 323 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AF279873.1-201ENST00000523393 313 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AC090819.1-201ENST00000523800 1111 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH12P55289 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH12P55289 OR5AZ1P-201ENST00000527448 943 ntBASIC4.37□□□□□ -1.71
CDH12P55289 CYCSP28-201ENST00000534284 321 ntBASIC4.37□□□□□ -1.71
CDH12P55289 UBE2NP1-201ENST00000545592 458 ntBASIC4.37□□□□□ -1.71
CDH12P55289 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH12P55289 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH12P55289 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH12P55289 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.37□□□□□ -1.71
CDH12P55289 SULT1C2P2-201ENST00000562517 294 ntBASIC4.37□□□□□ -1.71
CDH12P55289 OR4K7P-201ENST00000580232 945 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH12P55289 RN7SL52P-201ENST00000584271 284 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AC006539.2-201ENST00000601729 572 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AL390838.2-201ENST00000602394 274 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AC020910.3-201ENST00000603701 874 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AC009220.3-201ENST00000604318 586 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AL592221.1-201ENST00000605266 382 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.37□□□□□ -1.71
CDH12P55289 OR2AS2P-201ENST00000606902 342 ntBASIC4.37□□□□□ -1.71
CDH12P55289 MIR6862-1-201ENST00000613016 70 ntBASIC4.37□□□□□ -1.71
CDH12P55289 MIR6862-2-201ENST00000614755 70 ntBASIC4.37□□□□□ -1.71
CDH12P55289 MIR6886-201ENST00000619864 61 ntBASIC4.37□□□□□ -1.71
CDH12P55289 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CDH12P55289 CR381572.2-201ENST00000624852 397 ntBASIC4.37□□□□□ -1.71
CDH12P55289 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH12P55289 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.37□□□□□ -1.71
CDH12P55289 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 OR2L1P-202ENST00000641567 1023 ntBASIC4.37□□□□□ -1.71
CDH12P55289 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CDH12P55289 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH12P55289 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.37□□□□□ -1.71
CDH12P55289 AC022031.1-201ENST00000585985 2593 ntBASIC4.37□□□□□ -1.71
CDH12P55289 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CDH12P55289 AC021755.1-201ENST00000559747 1447 ntBASIC4.37□□□□□ -1.71
CDH12P55289 C4BPAP1-201ENST00000415474 1893 ntBASIC4.37□□□□□ -1.71
CDH12P55289 AC005539.1-201ENST00000443768 1479 ntBASIC4.37□□□□□ -1.71
CDH12P55289 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CDH12P55289 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 HSPA8P18-201ENST00000439846 1928 ntBASIC4.36□□□□□ -1.71
CDH12P55289 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.36□□□□□ -1.71
CDH12P55289 AL353743.4-201ENST00000422653 1547 ntBASIC4.36□□□□□ -1.71
CDH12P55289 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
CDH12P55289 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH12P55289 ELL2P3-201ENST00000457883 1602 ntBASIC4.36□□□□□ -1.71
CDH12P55289 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDH12P55289 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH12P55289 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH12P55289 RN7SKP95-201ENST00000362860 303 ntBASIC4.36□□□□□ -1.71
CDH12P55289 RNU6-931P-201ENST00000363850 107 ntBASIC4.36□□□□□ -1.71
CDH12P55289 RNU6-1151P-201ENST00000384684 107 ntBASIC4.36□□□□□ -1.71
CDH12P55289 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDH12P55289 MIR921-201ENST00000401133 56 ntBASIC4.36□□□□□ -1.71
CDH12P55289 AL139098.1-201ENST00000407291 389 ntBASIC4.36□□□□□ -1.71
CDH12P55289 RPL23AP47-201ENST00000408017 460 ntBASIC4.36□□□□□ -1.71
CDH12P55289 RNU2-65P-201ENST00000410162 185 ntBASIC4.36□□□□□ -1.71
CDH12P55289 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH12P55289 LUZP4P1-201ENST00000415420 344 ntBASIC4.36□□□□□ -1.71
CDH12P55289 SEPT2P1-201ENST00000419651 180 ntBASIC4.36□□□□□ -1.71
CDH12P55289 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH12P55289 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDH12P55289 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.36□□□□□ -1.71
CDH12P55289 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.36□□□□□ -1.71
CDH12P55289 AL591503.2-201ENST00000442314 1005 ntBASIC4.36□□□□□ -1.71
CDH12P55289 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.36□□□□□ -1.71
CDH12P55289 RPS27AP15-201ENST00000447672 466 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms