Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.27□□□□□ -1.73
NUP98P52948 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.27□□□□□ -1.73
NUP98P52948 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NUP98P52948 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.27□□□□□ -1.73
NUP98P52948 AC233309.1-201ENST00000619522 751 ntBASIC4.27□□□□□ -1.73
NUP98P52948 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.27□□□□□ -1.73
NUP98P52948 AC119744.1-201ENST00000454746 1715 ntBASIC4.27□□□□□ -1.73
NUP98P52948 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NUP98P52948 TNPO1P3-201ENST00000436471 2662 ntBASIC4.26□□□□□ -1.73
NUP98P52948 GNG5P1-201ENST00000255500 204 ntBASIC4.26□□□□□ -1.73
NUP98P52948 AL136131.1-201ENST00000406079 803 ntBASIC4.26□□□□□ -1.73
NUP98P52948 SNORA11.2-201ENST00000408318 127 ntBASIC4.26□□□□□ -1.73
NUP98P52948 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.26□□□□□ -1.73
NUP98P52948 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.26□□□□□ -1.73
NUP98P52948 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.26□□□□□ -1.73
NUP98P52948 AC069499.1-201ENST00000489433 509 ntBASIC4.26□□□□□ -1.73
NUP98P52948 DUXAP6-201ENST00000553858 601 ntBASIC4.26□□□□□ -1.73
NUP98P52948 AL353684.1-201ENST00000622677 1120 ntBASIC4.26□□□□□ -1.73
NUP98P52948 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUP98P52948 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUP98P52948 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.26□□□□□ -1.73
NUP98P52948 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
NUP98P52948 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.26□□□□□ -1.73
NUP98P52948 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
NUP98P52948 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUP98P52948 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUP98P52948 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NUP98P52948 RNU1-18P-201ENST00000363062 164 ntBASIC4.25□□□□□ -1.73
NUP98P52948 HSPE1P8-201ENST00000406997 288 ntBASIC4.25□□□□□ -1.73
NUP98P52948 OR1AA1P-201ENST00000419597 916 ntBASIC4.25□□□□□ -1.73
NUP98P52948 RN7SL594P-201ENST00000470590 287 ntBASIC4.25□□□□□ -1.73
NUP98P52948 RPL23AP71-201ENST00000470966 469 ntBASIC4.25□□□□□ -1.73
NUP98P52948 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.25□□□□□ -1.73
NUP98P52948 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP98P52948 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUP98P52948 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.25□□□□□ -1.73
NUP98P52948 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP98P52948 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP98P52948 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP98P52948 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.25□□□□□ -1.73
NUP98P52948 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NUP98P52948 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUP98P52948 LINC02471-203ENST00000641941 4752 ntBASIC4.25□□□□□ -1.73
NUP98P52948 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.25□□□□□ -1.73
NUP98P52948 AL353743.1-202ENST00000431724 1695 ntBASIC4.25□□□□□ -1.73
NUP98P52948 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
NUP98P52948 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
NUP98P52948 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP98P52948 RPS3AP14-201ENST00000483907 780 ntBASIC4.25□□□□□ -1.73
NUP98P52948 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP98P52948 HIGD1AP1-201ENST00000550979 275 ntBASIC4.25□□□□□ -1.73
NUP98P52948 AL158062.1-201ENST00000619632 745 ntBASIC4.25□□□□□ -1.73
NUP98P52948 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP98P52948 MTND5P12-201ENST00000502851 1449 ntBASIC4.24□□□□□ -1.73
NUP98P52948 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
NUP98P52948 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUP98P52948 RNA5SP104-201ENST00000410989 118 ntBASIC4.24□□□□□ -1.73
NUP98P52948 BOLA3P4-201ENST00000418151 400 ntBASIC4.24□□□□□ -1.73
NUP98P52948 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.24□□□□□ -1.73
NUP98P52948 AC002075.2-201ENST00000425207 252 ntBASIC4.24□□□□□ -1.73
NUP98P52948 AC005229.2-201ENST00000456995 399 ntBASIC4.24□□□□□ -1.73
NUP98P52948 AC099560.2-201ENST00000457554 255 ntBASIC4.24□□□□□ -1.73
NUP98P52948 RPL5P24-201ENST00000463742 885 ntBASIC4.24□□□□□ -1.73
NUP98P52948 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
NUP98P52948 ASNSP4-201ENST00000511103 447 ntBASIC4.24□□□□□ -1.73
NUP98P52948 RNU1-103P-201ENST00000516502 125 ntBASIC4.24□□□□□ -1.73
NUP98P52948 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.24□□□□□ -1.73
NUP98P52948 AP000926.4-201ENST00000527351 454 ntBASIC4.24□□□□□ -1.73
NUP98P52948 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.24□□□□□ -1.73
NUP98P52948 AC015802.5-201ENST00000607478 399 ntBASIC4.24□□□□□ -1.73
NUP98P52948 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.24□□□□□ -1.73
NUP98P52948 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUP98P52948 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.24□□□□□ -1.73
NUP98P52948 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NUP98P52948 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUP98P52948 AC024341.1-201ENST00000526444 1552 ntBASIC4.24□□□□□ -1.73
NUP98P52948 AL132656.3-201ENST00000606384 1595 ntBASIC4.24□□□□□ -1.73
NUP98P52948 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NUP98P52948 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUP98P52948 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.24□□□□□ -1.73
NUP98P52948 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.23□□□□□ -1.73
NUP98P52948 AC118273.1-201ENST00000525324 3006 ntBASIC4.23□□□□□ -1.73
NUP98P52948 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
NUP98P52948 SSR1P1-201ENST00000407630 814 ntBASIC4.23□□□□□ -1.73
NUP98P52948 MRPS18BP2-201ENST00000434310 759 ntBASIC4.23□□□□□ -1.73
NUP98P52948 RPS29P31-201ENST00000446147 164 ntBASIC4.23□□□□□ -1.73
NUP98P52948 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NUP98P52948 AL136126.1-201ENST00000473603 402 ntBASIC4.23□□□□□ -1.73
NUP98P52948 HMGB1P21-201ENST00000502313 581 ntBASIC4.23□□□□□ -1.73
NUP98P52948 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.23□□□□□ -1.73
NUP98P52948 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.23□□□□□ -1.73
NUP98P52948 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.23□□□□□ -1.73
NUP98P52948 HNRNPKP5-201ENST00000515300 253 ntBASIC4.23□□□□□ -1.73
NUP98P52948 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.23□□□□□ -1.73
NUP98P52948 AC026333.2-201ENST00000542164 106 ntBASIC4.23□□□□□ -1.73
NUP98P52948 BRDTP1-201ENST00000605735 677 ntBASIC4.23□□□□□ -1.73
NUP98P52948 MIR4727-201ENST00000622232 55 ntBASIC4.23□□□□□ -1.73
NUP98P52948 Z83843.1-201ENST00000604070 3685 ntBASIC4.23□□□□□ -1.73
NUP98P52948 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.23□□□□□ -1.73
NUP98P52948 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms