Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.1□□□□□ -1.59
NEK3P51956 AC021242.1-201ENST00000507315 2035 ntBASIC5.1□□□□□ -1.59
NEK3P51956 AC010587.2-201ENST00000511727 448 ntBASIC5.1□□□□□ -1.59
NEK3P51956 RNA5SP43-201ENST00000516559 110 ntBASIC5.1□□□□□ -1.59
NEK3P51956 AC090819.1-201ENST00000523800 1111 ntBASIC5.1□□□□□ -1.59
NEK3P51956 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.1□□□□□ -1.59
NEK3P51956 PDCL2P2-201ENST00000533651 189 ntBASIC5.1□□□□□ -1.59
NEK3P51956 AC005868.1-201ENST00000536421 331 ntBASIC5.1□□□□□ -1.59
NEK3P51956 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.1□□□□□ -1.59
NEK3P51956 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.1□□□□□ -1.59
NEK3P51956 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.1□□□□□ -1.59
NEK3P51956 AC026951.1-201ENST00000559530 2459 ntBASIC5.1□□□□□ -1.59
NEK3P51956 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.1□□□□□ -1.59
NEK3P51956 MIR3934-201ENST00000579806 107 ntBASIC5.1□□□□□ -1.59
NEK3P51956 NIFKP6-201ENST00000598115 845 ntBASIC5.1□□□□□ -1.59
NEK3P51956 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NEK3P51956 AC090246.1-201ENST00000616499 426 ntBASIC5.1□□□□□ -1.59
NEK3P51956 AC099669.2-201ENST00000616549 437 ntBASIC5.1□□□□□ -1.59
NEK3P51956 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.1□□□□□ -1.59
NEK3P51956 AP001784.1-201ENST00000624107 428 ntBASIC5.1□□□□□ -1.59
NEK3P51956 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NEK3P51956 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.1□□□□□ -1.59
NEK3P51956 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.09□□□□□ -1.59
NEK3P51956 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NEK3P51956 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NEK3P51956 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NEK3P51956 PABPC1P7-201ENST00000413177 1513 ntBASIC5.09□□□□□ -1.59
NEK3P51956 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
NEK3P51956 RN7SKP95-201ENST00000362860 303 ntBASIC5.09□□□□□ -1.59
NEK3P51956 RNU1-130P-201ENST00000363930 160 ntBASIC5.09□□□□□ -1.59
NEK3P51956 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NEK3P51956 SNORA2.3-201ENST00000383920 135 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AL139128.1-201ENST00000413921 941 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AC107081.1-201ENST00000414975 361 ntBASIC5.09□□□□□ -1.59
NEK3P51956 TMBIM7P-201ENST00000418074 855 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.09□□□□□ -1.59
NEK3P51956 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC5.09□□□□□ -1.59
NEK3P51956 MTND1P32-201ENST00000433043 938 ntBASIC5.09□□□□□ -1.59
NEK3P51956 MTCO2P20-201ENST00000437339 673 ntBASIC5.09□□□□□ -1.59
NEK3P51956 PRPF38AP2-201ENST00000438179 851 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.09□□□□□ -1.59
NEK3P51956 MTND3P1-201ENST00000441336 220 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AL137845.2-201ENST00000444292 988 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AL031584.1-201ENST00000447169 754 ntBASIC5.09□□□□□ -1.59
NEK3P51956 RPL29P29-201ENST00000448725 423 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.09□□□□□ -1.59
NEK3P51956 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.09□□□□□ -1.59
NEK3P51956 RPS3AP41-201ENST00000462701 778 ntBASIC5.09□□□□□ -1.59
NEK3P51956 MTCO2P6-201ENST00000463134 685 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.09□□□□□ -1.59
NEK3P51956 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.09□□□□□ -1.59
NEK3P51956 HMGB1P28-201ENST00000507778 552 ntBASIC5.09□□□□□ -1.59
NEK3P51956 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.09□□□□□ -1.59
NEK3P51956 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.09□□□□□ -1.59
NEK3P51956 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.09□□□□□ -1.59
NEK3P51956 BRD9P1-201ENST00000529855 560 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.09□□□□□ -1.59
NEK3P51956 OR8L1P-201ENST00000534005 955 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.09□□□□□ -1.59
NEK3P51956 AC092470.1-201ENST00000546187 132 ntBASIC5.09□□□□□ -1.59
NEK3P51956 DUXAP1-201ENST00000556632 463 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.09□□□□□ -1.59
NEK3P51956 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.09□□□□□ -1.59
NEK3P51956 AP001180.3-201ENST00000582221 145 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.09□□□□□ -1.59
NEK3P51956 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.09□□□□□ -1.59
NEK3P51956 VN1R78P-201ENST00000597393 564 ntBASIC5.09□□□□□ -1.59
NEK3P51956 MEMO1P5-201ENST00000604810 406 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AL513477.2-201ENST00000607858 568 ntBASIC5.09□□□□□ -1.59
NEK3P51956 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.09□□□□□ -1.59
NEK3P51956 AL355493.4-201ENST00000618530 292 ntBASIC5.09□□□□□ -1.59
NEK3P51956 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.09□□□□□ -1.59
NEK3P51956 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.09□□□□□ -1.59
NEK3P51956 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.09□□□□□ -1.59
NEK3P51956 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
NEK3P51956 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.6
NEK3P51956 AC130650.2-201ENST00000618736 2403 ntBASIC5.08□□□□□ -1.6
NEK3P51956 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.08□□□□□ -1.6
NEK3P51956 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.08□□□□□ -1.6
NEK3P51956 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
NEK3P51956 RN7SKP103-201ENST00000363848 320 ntBASIC5.08□□□□□ -1.6
NEK3P51956 RNU6-1122P-201ENST00000384449 107 ntBASIC5.08□□□□□ -1.6
NEK3P51956 COX6B1P1-201ENST00000415962 213 ntBASIC5.08□□□□□ -1.6
NEK3P51956 CHEK2P3-201ENST00000416118 248 ntBASIC5.08□□□□□ -1.6
NEK3P51956 CYCSP10-201ENST00000417973 294 ntBASIC5.08□□□□□ -1.6
NEK3P51956 BX323845.1-201ENST00000432417 179 ntBASIC5.08□□□□□ -1.6
NEK3P51956 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.08□□□□□ -1.6
NEK3P51956 IGHV5-78-201ENST00000450948 295 ntBASIC5.08□□□□□ -1.6
NEK3P51956 AC104073.1-201ENST00000451988 151 ntBASIC5.08□□□□□ -1.6
NEK3P51956 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NEK3P51956 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NEK3P51956 RPL7P38-201ENST00000488396 739 ntBASIC5.08□□□□□ -1.6
NEK3P51956 RN7SL441P-201ENST00000492388 296 ntBASIC5.08□□□□□ -1.6
NEK3P51956 MTCYBP37-201ENST00000510642 1133 ntBASIC5.08□□□□□ -1.6
NEK3P51956 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.08□□□□□ -1.6
NEK3P51956 AC105185.1-201ENST00000518705 535 ntBASIC5.08□□□□□ -1.6
NEK3P51956 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.08□□□□□ -1.6
NEK3P51956 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.08□□□□□ -1.6
NEK3P51956 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.08□□□□□ -1.6
NEK3P51956 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms