Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.28□□□□□ -1.4
USP11P51784 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.28□□□□□ -1.4
USP11P51784 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.28□□□□□ -1.4
USP11P51784 RN7SL583P-201ENST00000475692 287 ntBASIC6.28□□□□□ -1.4
USP11P51784 RPL39P36-201ENST00000490784 156 ntBASIC6.28□□□□□ -1.4
USP11P51784 EIF3LP3-201ENST00000495197 822 ntBASIC6.28□□□□□ -1.4
USP11P51784 AC090638.1-201ENST00000498296 909 ntBASIC6.28□□□□□ -1.4
USP11P51784 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USP11P51784 IGBP1P4-201ENST00000503202 879 ntBASIC6.28□□□□□ -1.4
USP11P51784 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.28□□□□□ -1.4
USP11P51784 RNU6-1004P-201ENST00000516584 111 ntBASIC6.28□□□□□ -1.4
USP11P51784 Y_RNA.693-201ENST00000516641 110 ntBASIC6.28□□□□□ -1.4
USP11P51784 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.28□□□□□ -1.4
USP11P51784 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.28□□□□□ -1.4
USP11P51784 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.28□□□□□ -1.4
USP11P51784 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.28□□□□□ -1.4
USP11P51784 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.28□□□□□ -1.4
USP11P51784 FAM106CP-201ENST00000582212 507 ntBASIC6.28□□□□□ -1.4
USP11P51784 AC009977.1-201ENST00000586015 570 ntBASIC6.28□□□□□ -1.4
USP11P51784 BNIP3P10-201ENST00000605360 577 ntBASIC6.28□□□□□ -1.4
USP11P51784 RNU6-84P-201ENST00000607737 102 ntBASIC6.28□□□□□ -1.4
USP11P51784 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USP11P51784 AC104010.1-201ENST00000616889 150 ntBASIC6.28□□□□□ -1.4
USP11P51784 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.28□□□□□ -1.4
USP11P51784 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC6.28□□□□□ -1.4
USP11P51784 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.28□□□□□ -1.4
USP11P51784 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USP11P51784 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USP11P51784 AC138915.3-201ENST00000562908 1389 ntBASIC6.28□□□□□ -1.4
USP11P51784 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.28□□□□□ -1.4
USP11P51784 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.28□□□□□ -1.4
USP11P51784 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USP11P51784 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
USP11P51784 AC006206.1-201ENST00000544842 3387 ntBASIC6.27□□□□□ -1.4
USP11P51784 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
USP11P51784 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.27□□□□□ -1.41
USP11P51784 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
USP11P51784 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USP11P51784 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USP11P51784 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USP11P51784 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.27□□□□□ -1.41
USP11P51784 MTCO1P11-201ENST00000429111 1528 ntBASIC6.27□□□□□ -1.41
USP11P51784 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
USP11P51784 RNA5SP319-201ENST00000362768 119 ntBASIC6.27□□□□□ -1.41
USP11P51784 RNU6-839P-201ENST00000363347 108 ntBASIC6.27□□□□□ -1.41
USP11P51784 RNU6-619P-201ENST00000365146 108 ntBASIC6.27□□□□□ -1.41
USP11P51784 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
USP11P51784 RPS24P12-201ENST00000402084 394 ntBASIC6.27□□□□□ -1.41
USP11P51784 AL589647.1-201ENST00000402485 466 ntBASIC6.27□□□□□ -1.41
USP11P51784 Z97832.1-201ENST00000402490 328 ntBASIC6.27□□□□□ -1.41
USP11P51784 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.27□□□□□ -1.41
USP11P51784 OR3A2-201ENST00000408891 1076 ntBASIC6.27□□□□□ -1.41
USP11P51784 HMGB1P11-201ENST00000413899 637 ntBASIC6.27□□□□□ -1.41
USP11P51784 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.27□□□□□ -1.41
USP11P51784 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.27□□□□□ -1.41
USP11P51784 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.27□□□□□ -1.41
USP11P51784 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.27□□□□□ -1.41
USP11P51784 RPL7P56-201ENST00000429441 717 ntBASIC6.27□□□□□ -1.41
USP11P51784 BX276092.6-201ENST00000430476 250 ntBASIC6.27□□□□□ -1.41
USP11P51784 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC6.27□□□□□ -1.41
USP11P51784 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.27□□□□□ -1.41
USP11P51784 FABP3P2-201ENST00000453169 399 ntBASIC6.27□□□□□ -1.41
USP11P51784 BX276092.8-201ENST00000455722 250 ntBASIC6.27□□□□□ -1.41
USP11P51784 RPL7P42-201ENST00000481005 679 ntBASIC6.27□□□□□ -1.41
USP11P51784 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.27□□□□□ -1.41
USP11P51784 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.27□□□□□ -1.41
USP11P51784 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.27□□□□□ -1.41
USP11P51784 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.27□□□□□ -1.41
USP11P51784 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.27□□□□□ -1.41
USP11P51784 PSMA3P-201ENST00000555485 635 ntBASIC6.27□□□□□ -1.41
USP11P51784 AC087477.6-201ENST00000559595 843 ntBASIC6.27□□□□□ -1.41
USP11P51784 AC107954.1-201ENST00000565906 727 ntBASIC6.27□□□□□ -1.41
USP11P51784 AC015917.1-201ENST00000579654 510 ntBASIC6.27□□□□□ -1.41
USP11P51784 AC109309.2-201ENST00000612597 332 ntBASIC6.27□□□□□ -1.41
USP11P51784 AC005332.6-201ENST00000613178 446 ntBASIC6.27□□□□□ -1.41
USP11P51784 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.27□□□□□ -1.41
USP11P51784 MIR6886-201ENST00000619864 61 ntBASIC6.27□□□□□ -1.41
USP11P51784 AC005618.4-201ENST00000625053 554 ntBASIC6.27□□□□□ -1.41
USP11P51784 AL049767.1-202ENST00000637826 242 ntBASIC6.27□□□□□ -1.41
USP11P51784 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
USP11P51784 AC100871.1-201ENST00000507871 1456 ntBASIC6.27□□□□□ -1.41
USP11P51784 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
USP11P51784 AC018809.2-201ENST00000602436 3823 ntBASIC6.27□□□□□ -1.41
USP11P51784 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
USP11P51784 CASC19-260ENST00000641828 2001 ntBASIC6.26□□□□□ -1.41
USP11P51784 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.26□□□□□ -1.41
USP11P51784 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.26□□□□□ -1.41
USP11P51784 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP11P51784 AC114774.1-201ENST00000507410 1770 ntBASIC6.26□□□□□ -1.41
USP11P51784 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
USP11P51784 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
USP11P51784 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
USP11P51784 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
USP11P51784 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.26□□□□□ -1.41
USP11P51784 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
USP11P51784 Y_RNA.86-201ENST00000363020 111 ntBASIC6.26□□□□□ -1.41
USP11P51784 MT-TP-201ENST00000387461 68 ntBASIC6.26□□□□□ -1.41
USP11P51784 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
USP11P51784 SNORA11C-201ENST00000408532 129 ntBASIC6.26□□□□□ -1.41
USP11P51784 JKAMPP1-201ENST00000413804 919 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms