Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.68□□□□□ -1.82
BRCA2P51587 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
BRCA2P51587 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BRCA2P51587 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.67□□□□□ -1.82
BRCA2P51587 AL391417.1-201ENST00000404100 426 ntBASIC3.67□□□□□ -1.82
BRCA2P51587 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.67□□□□□ -1.82
BRCA2P51587 TPTE2P3-201ENST00000441562 1189 ntBASIC3.67□□□□□ -1.82
BRCA2P51587 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
BRCA2P51587 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRCA2P51587 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
BRCA2P51587 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BRCA2P51587 AL353678.1-201ENST00000422735 741 ntBASIC3.67□□□□□ -1.82
BRCA2P51587 AC023598.1-201ENST00000472521 361 ntBASIC3.67□□□□□ -1.82
BRCA2P51587 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.67□□□□□ -1.82
BRCA2P51587 UBL5P2-201ENST00000583788 219 ntBASIC3.67□□□□□ -1.82
BRCA2P51587 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRCA2P51587 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.67□□□□□ -1.82
BRCA2P51587 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BRCA2P51587 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.67□□□□□ -1.82
BRCA2P51587 HMGB3P20-201ENST00000417997 600 ntBASIC3.67□□□□□ -1.82
BRCA2P51587 RPL35AP12-201ENST00000425362 338 ntBASIC3.67□□□□□ -1.82
BRCA2P51587 BX119904.1-201ENST00000432026 348 ntBASIC3.67□□□□□ -1.82
BRCA2P51587 MAPRE1P3-201ENST00000435438 796 ntBASIC3.67□□□□□ -1.82
BRCA2P51587 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.67□□□□□ -1.82
BRCA2P51587 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.67□□□□□ -1.82
BRCA2P51587 H3F3AP1-201ENST00000559984 334 ntBASIC3.67□□□□□ -1.82
BRCA2P51587 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.67□□□□□ -1.82
BRCA2P51587 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.67□□□□□ -1.82
BRCA2P51587 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRCA2P51587 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.67□□□□□ -1.82
BRCA2P51587 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 RIOK3P1-201ENST00000418778 1528 ntBASIC3.66□□□□□ -1.82
BRCA2P51587 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.66□□□□□ -1.82
BRCA2P51587 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.66□□□□□ -1.82
BRCA2P51587 DYNLL1P7-201ENST00000429273 258 ntBASIC3.66□□□□□ -1.82
BRCA2P51587 AC084357.1-201ENST00000473404 255 ntBASIC3.66□□□□□ -1.82
BRCA2P51587 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.66□□□□□ -1.82
BRCA2P51587 KLKP1-201ENST00000595979 403 ntBASIC3.66□□□□□ -1.82
BRCA2P51587 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.66□□□□□ -1.82
BRCA2P51587 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC3.66□□□□□ -1.82
BRCA2P51587 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
BRCA2P51587 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 AL031584.1-201ENST00000447169 754 ntBASIC3.66□□□□□ -1.82
BRCA2P51587 HMGB1P3-201ENST00000502802 616 ntBASIC3.66□□□□□ -1.82
BRCA2P51587 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.66□□□□□ -1.82
BRCA2P51587 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
BRCA2P51587 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
BRCA2P51587 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 AC099063.2-201ENST00000446360 662 ntBASIC3.66□□□□□ -1.82
BRCA2P51587 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 FCF1P8-201ENST00000510322 597 ntBASIC3.66□□□□□ -1.82
BRCA2P51587 OR4C2P-201ENST00000530855 1064 ntBASIC3.66□□□□□ -1.82
BRCA2P51587 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRCA2P51587 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.66□□□□□ -1.82
BRCA2P51587 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC3.65□□□□□ -1.82
BRCA2P51587 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
BRCA2P51587 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC3.65□□□□□ -1.82
BRCA2P51587 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
BRCA2P51587 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.65□□□□□ -1.82
BRCA2P51587 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.65□□□□□ -1.82
BRCA2P51587 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.65□□□□□ -1.82
BRCA2P51587 AL136097.1-201ENST00000456945 913 ntBASIC3.65□□□□□ -1.82
BRCA2P51587 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.65□□□□□ -1.82
BRCA2P51587 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.65□□□□□ -1.82
BRCA2P51587 AL359219.2-201ENST00000555184 348 ntBASIC3.65□□□□□ -1.82
BRCA2P51587 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.65□□□□□ -1.82
BRCA2P51587 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.65□□□□□ -1.82
BRCA2P51587 AC004832.5-201ENST00000608677 401 ntBASIC3.65□□□□□ -1.82
BRCA2P51587 AL162574.2-201ENST00000614618 657 ntBASIC3.65□□□□□ -1.82
BRCA2P51587 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.65□□□□□ -1.82
BRCA2P51587 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.65□□□□□ -1.82
BRCA2P51587 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.65□□□□□ -1.82
BRCA2P51587 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
BRCA2P51587 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.65□□□□□ -1.83
BRCA2P51587 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.65□□□□□ -1.83
BRCA2P51587 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.65□□□□□ -1.83
BRCA2P51587 RN7SKP31-201ENST00000516354 278 ntBASIC3.65□□□□□ -1.83
BRCA2P51587 AC241585.2-209ENST00000638217 143 ntBASIC3.65□□□□□ -1.83
BRCA2P51587 AC092435.3-201ENST00000565538 3654 ntBASIC3.64□□□□□ -1.83
BRCA2P51587 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.64□□□□□ -1.83
BRCA2P51587 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.64□□□□□ -1.83
BRCA2P51587 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC3.64□□□□□ -1.83
BRCA2P51587 PPBPP1-201ENST00000510807 373 ntBASIC3.64□□□□□ -1.83
BRCA2P51587 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.64□□□□□ -1.83
BRCA2P51587 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.64□□□□□ -1.83
BRCA2P51587 VN1R90P-201ENST00000595717 726 ntBASIC3.64□□□□□ -1.83
BRCA2P51587 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
BRCA2P51587 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
BRCA2P51587 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms