Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AC022726.1-201ENST00000587475 207 ntBASIC5□□□□□ -1.61
CHKAP35790 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5□□□□□ -1.61
CHKAP35790 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5□□□□□ -1.61
CHKAP35790 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5□□□□□ -1.61
CHKAP35790 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5□□□□□ -1.61
CHKAP35790 AC113194.1-201ENST00000606037 500 ntBASIC5□□□□□ -1.61
CHKAP35790 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CHKAP35790 RN7SL722P-201ENST00000617780 284 ntBASIC5□□□□□ -1.61
CHKAP35790 RN7SL565P-201ENST00000618246 284 ntBASIC5□□□□□ -1.61
CHKAP35790 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5□□□□□ -1.61
CHKAP35790 AL022401.1-201ENST00000619498 108 ntBASIC5□□□□□ -1.61
CHKAP35790 AC000123.2-201ENST00000623124 461 ntBASIC5□□□□□ -1.61
CHKAP35790 AP000770.2-201ENST00000623694 100 ntBASIC5□□□□□ -1.61
CHKAP35790 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5□□□□□ -1.61
CHKAP35790 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5□□□□□ -1.61
CHKAP35790 ZNF33CP-201ENST00000432492 2030 ntBASIC5□□□□□ -1.61
CHKAP35790 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CHKAP35790 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHKAP35790 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHKAP35790 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHKAP35790 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHKAP35790 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHKAP35790 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHKAP35790 AC079741.1-201ENST00000321498 212 ntBASIC4.99□□□□□ -1.61
CHKAP35790 RNU6-1243P-201ENST00000364028 107 ntBASIC4.99□□□□□ -1.61
CHKAP35790 RNU4-28P-201ENST00000364739 141 ntBASIC4.99□□□□□ -1.61
CHKAP35790 ZNF603P-201ENST00000405613 487 ntBASIC4.99□□□□□ -1.61
CHKAP35790 RPS16P5-201ENST00000406501 404 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.99□□□□□ -1.61
CHKAP35790 HIGD1AP15-201ENST00000416198 280 ntBASIC4.99□□□□□ -1.61
CHKAP35790 RPL22P18-201ENST00000417197 377 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AC092634.6-201ENST00000418558 192 ntBASIC4.99□□□□□ -1.61
CHKAP35790 XKRYP1-201ENST00000423438 492 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.99□□□□□ -1.61
CHKAP35790 AC005345.1-201ENST00000431868 217 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.99□□□□□ -1.61
CHKAP35790 XKRYP2-201ENST00000432915 492 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AL359265.2-201ENST00000434367 631 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AC005154.2-201ENST00000438110 379 ntBASIC4.99□□□□□ -1.61
CHKAP35790 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.99□□□□□ -1.61
CHKAP35790 PTENP1-201ENST00000447117 1215 ntBASIC4.99□□□□□ -1.61
CHKAP35790 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.99□□□□□ -1.61
CHKAP35790 AC004022.1-201ENST00000447766 1066 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AC073264.2-201ENST00000448886 166 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.99□□□□□ -1.61
CHKAP35790 AC010733.1-201ENST00000451515 401 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AC005726.1-201ENST00000494679 427 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AC104971.1-201ENST00000495117 578 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.99□□□□□ -1.61
CHKAP35790 RNU6-1225P-201ENST00000516336 65 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.99□□□□□ -1.61
CHKAP35790 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.99□□□□□ -1.61
CHKAP35790 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.99□□□□□ -1.61
CHKAP35790 PTP4A1P6-201ENST00000531034 478 ntBASIC4.99□□□□□ -1.61
CHKAP35790 CYCSP28-201ENST00000534284 321 ntBASIC4.99□□□□□ -1.61
CHKAP35790 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CHKAP35790 AC133555.2-201ENST00000550213 292 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.99□□□□□ -1.61
CHKAP35790 AL049839.1-201ENST00000556151 657 ntBASIC4.99□□□□□ -1.61
CHKAP35790 MIR4330-201ENST00000579077 105 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AC013470.4-201ENST00000619978 986 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AP002782.1-201ENST00000623107 614 ntBASIC4.99□□□□□ -1.61
CHKAP35790 AC098679.5-201ENST00000624394 571 ntBASIC4.99□□□□□ -1.61
CHKAP35790 MKKS-204ENST00000639674 192 ntBASIC4.99□□□□□ -1.61
CHKAP35790 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CHKAP35790 ELL2P4-201ENST00000446870 1376 ntBASIC4.99□□□□□ -1.61
CHKAP35790 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.99□□□□□ -1.61
CHKAP35790 AC009951.1-201ENST00000623674 2614 ntBASIC4.99□□□□□ -1.61
CHKAP35790 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
CHKAP35790 AC091046.3-201ENST00000631455 1574 ntBASIC4.99□□□□□ -1.61
CHKAP35790 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHKAP35790 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.98□□□□□ -1.61
CHKAP35790 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHKAP35790 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.98□□□□□ -1.61
CHKAP35790 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.98□□□□□ -1.61
CHKAP35790 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHKAP35790 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHKAP35790 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHKAP35790 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CHKAP35790 MIR649-201ENST00000384843 97 ntBASIC4.98□□□□□ -1.61
CHKAP35790 RNU6-1242P-201ENST00000391052 103 ntBASIC4.98□□□□□ -1.61
CHKAP35790 U3.30-201ENST00000391308 210 ntBASIC4.98□□□□□ -1.61
CHKAP35790 BTBD10P2-201ENST00000404779 676 ntBASIC4.98□□□□□ -1.61
CHKAP35790 AL136133.1-201ENST00000413694 376 ntBASIC4.98□□□□□ -1.61
CHKAP35790 AC119751.6-201ENST00000416712 186 ntBASIC4.98□□□□□ -1.61
CHKAP35790 ELOCP9-201ENST00000418624 239 ntBASIC4.98□□□□□ -1.61
CHKAP35790 LINC00993-201ENST00000420453 540 ntBASIC4.98□□□□□ -1.61
CHKAP35790 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHKAP35790 OR4F13P-201ENST00000428478 931 ntBASIC4.98□□□□□ -1.61
CHKAP35790 HMGB3P5-201ENST00000428894 612 ntBASIC4.98□□□□□ -1.61
CHKAP35790 SKP1P3-201ENST00000429280 487 ntBASIC4.98□□□□□ -1.61
CHKAP35790 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.98□□□□□ -1.61
CHKAP35790 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.98□□□□□ -1.61
CHKAP35790 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.98□□□□□ -1.61
CHKAP35790 AC016831.4-201ENST00000438302 307 ntBASIC4.98□□□□□ -1.61
CHKAP35790 AC004938.1-201ENST00000438468 308 ntBASIC4.98□□□□□ -1.61
CHKAP35790 H2AFZP6-201ENST00000444403 394 ntBASIC4.98□□□□□ -1.61
CHKAP35790 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CHKAP35790 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.98□□□□□ -1.61
CHKAP35790 RN7SL558P-201ENST00000497468 299 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms