Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 NPM1P24-201ENST00000428039 894 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.03□□□□□ -1.6
TM4SF1P30408 TPTE2P6-202ENST00000445572 1007 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 AL096829.2-201ENST00000446582 742 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.03□□□□□ -1.6
TM4SF1P30408 AL096803.2-201ENST00000450032 677 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.03□□□□□ -1.6
TM4SF1P30408 EIF4A1P11-201ENST00000451239 222 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 UBTFL6-201ENST00000477929 1024 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.03□□□□□ -1.6
TM4SF1P30408 NAMPTP2-201ENST00000505629 1115 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 AC138938.1-201ENST00000515431 782 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.03□□□□□ -1.6
TM4SF1P30408 AC007991.1-201ENST00000522680 631 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TM4SF1P30408 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.03□□□□□ -1.6
TM4SF1P30408 AL355816.1-201ENST00000607951 118 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 FRG1HP-204ENST00000617940 757 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 AC140113.4-201ENST00000622087 222 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 AC010872.1-201ENST00000624225 675 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 U6.105-201ENST00000637379 88 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.03□□□□□ -1.6
TM4SF1P30408 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
TM4SF1P30408 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TM4SF1P30408 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TM4SF1P30408 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TM4SF1P30408 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
TM4SF1P30408 AL022311.1-201ENST00000623726 19416 ntBASIC5.03□□□□□ -1.6
TM4SF1P30408 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.03□□□□□ -1.6
TM4SF1P30408 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TM4SF1P30408 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.03□□□□□ -1.6
TM4SF1P30408 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TM4SF1P30408 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.02□□□□□ -1.61
TM4SF1P30408 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TM4SF1P30408 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
TM4SF1P30408 U1.1-201ENST00000384101 164 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 U3.23-201ENST00000391132 200 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 SNORA11.2-201ENST00000408318 127 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.02□□□□□ -1.61
TM4SF1P30408 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.02□□□□□ -1.61
TM4SF1P30408 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.02□□□□□ -1.61
TM4SF1P30408 AC092170.1-201ENST00000440211 356 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.02□□□□□ -1.61
TM4SF1P30408 RPL36AP13-201ENST00000457490 317 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 SNRPCP3-201ENST00000474888 476 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.02□□□□□ -1.61
TM4SF1P30408 RNU7-143P-201ENST00000516781 65 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 IGKV2-36-201ENST00000519999 223 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 SMARCE1P4-201ENST00000523647 241 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.02□□□□□ -1.61
TM4SF1P30408 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.02□□□□□ -1.61
TM4SF1P30408 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.02□□□□□ -1.61
TM4SF1P30408 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TM4SF1P30408 AL121594.4-201ENST00000556211 1196 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 MIR3922-201ENST00000585192 84 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.02□□□□□ -1.61
TM4SF1P30408 AL049634.3-201ENST00000604968 457 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 AL391497.1-201ENST00000608671 547 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 AL159169.3-201ENST00000608871 561 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 AC243654.2-201ENST00000612843 443 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 AC015871.5-202ENST00000623252 701 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.02□□□□□ -1.61
TM4SF1P30408 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.02□□□□□ -1.61
TM4SF1P30408 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.02□□□□□ -1.61
TM4SF1P30408 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.02□□□□□ -1.61
TM4SF1P30408 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TM4SF1P30408 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TM4SF1P30408 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.02□□□□□ -1.61
TM4SF1P30408 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.02□□□□□ -1.61
TM4SF1P30408 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
TM4SF1P30408 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TM4SF1P30408 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
TM4SF1P30408 AC083899.2-201ENST00000423285 1376 ntBASIC5.02□□□□□ -1.61
TM4SF1P30408 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.02□□□□□ -1.61
TM4SF1P30408 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TM4SF1P30408 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TM4SF1P30408 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
TM4SF1P30408 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TM4SF1P30408 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
TM4SF1P30408 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TM4SF1P30408 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.01□□□□□ -1.61
TM4SF1P30408 MIR1303-201ENST00000408625 86 ntBASIC5.01□□□□□ -1.61
TM4SF1P30408 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.01□□□□□ -1.61
TM4SF1P30408 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.01□□□□□ -1.61
TM4SF1P30408 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.01□□□□□ -1.61
TM4SF1P30408 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.01□□□□□ -1.61
TM4SF1P30408 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.01□□□□□ -1.61
TM4SF1P30408 AC011242.1-201ENST00000433596 1158 ntBASIC5.01□□□□□ -1.61
TM4SF1P30408 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TM4SF1P30408 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.01□□□□□ -1.61
TM4SF1P30408 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TM4SF1P30408 HMGN1P5-201ENST00000448591 263 ntBASIC5.01□□□□□ -1.61
TM4SF1P30408 MTND2P8-201ENST00000450555 1025 ntBASIC5.01□□□□□ -1.61
TM4SF1P30408 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TM4SF1P30408 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.01□□□□□ -1.61
TM4SF1P30408 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms