Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC092747.2-201ENST00000545069 983 ntBASIC4.1□□□□□ -1.75
COL4A5P29400 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A5P29400 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A5P29400 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.1□□□□□ -1.75
COL4A5P29400 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A5P29400 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.1□□□□□ -1.75
COL4A5P29400 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A5P29400 AC092111.2-201ENST00000611627 1414 ntBASIC4.1□□□□□ -1.75
COL4A5P29400 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
COL4A5P29400 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.1□□□□□ -1.75
COL4A5P29400 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
COL4A5P29400 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
COL4A5P29400 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A5P29400 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.1□□□□□ -1.75
COL4A5P29400 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A5P29400 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A5P29400 RNU1-18P-201ENST00000363062 164 ntBASIC4.1□□□□□ -1.75
COL4A5P29400 SNORA54-201ENST00000384281 123 ntBASIC4.1□□□□□ -1.75
COL4A5P29400 MTND4P22-201ENST00000413116 1169 ntBASIC4.1□□□□□ -1.75
COL4A5P29400 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.1□□□□□ -1.75
COL4A5P29400 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.1□□□□□ -1.75
COL4A5P29400 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.1□□□□□ -1.75
COL4A5P29400 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.1□□□□□ -1.75
COL4A5P29400 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.1□□□□□ -1.75
COL4A5P29400 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.1□□□□□ -1.75
COL4A5P29400 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A5P29400 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.1□□□□□ -1.75
COL4A5P29400 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
COL4A5P29400 AL121766.1-201ENST00000547436 487 ntBASIC4.1□□□□□ -1.75
COL4A5P29400 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.1□□□□□ -1.75
COL4A5P29400 AC006504.3-201ENST00000586818 523 ntBASIC4.1□□□□□ -1.75
COL4A5P29400 AC073657.2-201ENST00000605661 303 ntBASIC4.1□□□□□ -1.75
COL4A5P29400 AL359757.2-201ENST00000624309 274 ntBASIC4.1□□□□□ -1.75
COL4A5P29400 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL4A5P29400 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
COL4A5P29400 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.09□□□□□ -1.75
COL4A5P29400 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
COL4A5P29400 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.09□□□□□ -1.75
COL4A5P29400 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
COL4A5P29400 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
COL4A5P29400 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
COL4A5P29400 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
COL4A5P29400 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.09□□□□□ -1.75
COL4A5P29400 RNU1-70P-201ENST00000362618 164 ntBASIC4.09□□□□□ -1.76
COL4A5P29400 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.09□□□□□ -1.76
COL4A5P29400 BX119904.1-201ENST00000432026 348 ntBASIC4.09□□□□□ -1.76
COL4A5P29400 AC233982.1-201ENST00000451247 436 ntBASIC4.09□□□□□ -1.76
COL4A5P29400 RPS3AP43-201ENST00000479743 781 ntBASIC4.09□□□□□ -1.76
COL4A5P29400 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.09□□□□□ -1.76
COL4A5P29400 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.09□□□□□ -1.76
COL4A5P29400 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.09□□□□□ -1.76
COL4A5P29400 AC004024.1-201ENST00000549244 247 ntBASIC4.09□□□□□ -1.76
COL4A5P29400 AC104984.5-201ENST00000586878 94 ntBASIC4.09□□□□□ -1.76
COL4A5P29400 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.09□□□□□ -1.76
COL4A5P29400 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL4A5P29400 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
COL4A5P29400 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
COL4A5P29400 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A5P29400 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.08□□□□□ -1.76
COL4A5P29400 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
COL4A5P29400 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.08□□□□□ -1.76
COL4A5P29400 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
COL4A5P29400 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A5P29400 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
COL4A5P29400 RNU6-301P-201ENST00000384277 107 ntBASIC4.08□□□□□ -1.76
COL4A5P29400 SSR1P1-201ENST00000407630 814 ntBASIC4.08□□□□□ -1.76
COL4A5P29400 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.08□□□□□ -1.76
COL4A5P29400 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
COL4A5P29400 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.08□□□□□ -1.76
COL4A5P29400 AC008489.1-201ENST00000524271 483 ntBASIC4.08□□□□□ -1.76
COL4A5P29400 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.08□□□□□ -1.76
COL4A5P29400 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.08□□□□□ -1.76
COL4A5P29400 SULT1C2P2-201ENST00000562517 294 ntBASIC4.08□□□□□ -1.76
COL4A5P29400 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.08□□□□□ -1.76
COL4A5P29400 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.08□□□□□ -1.76
COL4A5P29400 AC100793.4-201ENST00000613683 429 ntBASIC4.08□□□□□ -1.76
COL4A5P29400 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.08□□□□□ -1.76
COL4A5P29400 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A5P29400 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A5P29400 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL4A5P29400 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.07□□□□□ -1.76
COL4A5P29400 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL4A5P29400 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL4A5P29400 RNU6-729P-201ENST00000384399 107 ntBASIC4.07□□□□□ -1.76
COL4A5P29400 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
COL4A5P29400 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.07□□□□□ -1.76
COL4A5P29400 AL139095.1-201ENST00000404326 391 ntBASIC4.07□□□□□ -1.76
COL4A5P29400 RNA5SP80-201ENST00000410475 111 ntBASIC4.07□□□□□ -1.76
COL4A5P29400 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL4A5P29400 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL4A5P29400 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.07□□□□□ -1.76
COL4A5P29400 RPL12P18-201ENST00000437175 325 ntBASIC4.07□□□□□ -1.76
COL4A5P29400 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.07□□□□□ -1.76
COL4A5P29400 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.07□□□□□ -1.76
COL4A5P29400 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.07□□□□□ -1.76
COL4A5P29400 RPL7L1P13-201ENST00000511702 739 ntBASIC4.07□□□□□ -1.76
COL4A5P29400 AC093732.2-201ENST00000607950 274 ntBASIC4.07□□□□□ -1.76
COL4A5P29400 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.07□□□□□ -1.76
COL4A5P29400 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.07□□□□□ -1.76
COL4A5P29400 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms