Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC090572.1-201ENST00000519251 160 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.23□□□□□ -1.41
NFKB1P19838 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.23□□□□□ -1.41
NFKB1P19838 OR4R1P-201ENST00000529879 463 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.23□□□□□ -1.41
NFKB1P19838 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.23□□□□□ -1.41
NFKB1P19838 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC6.23□□□□□ -1.41
NFKB1P19838 AC008126.1-201ENST00000549019 480 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
NFKB1P19838 MIR132-201ENST00000591554 101 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NFKB1P19838 7SK.7-201ENST00000603504 247 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 AL627309.6-201ENST00000606857 840 ntBASIC6.23□□□□□ -1.41
NFKB1P19838 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.23□□□□□ -1.41
NFKB1P19838 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NFKB1P19838 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NFKB1P19838 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.23□□□□□ -1.41
NFKB1P19838 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
NFKB1P19838 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
NFKB1P19838 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NFKB1P19838 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
NFKB1P19838 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.23□□□□□ -1.41
NFKB1P19838 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NFKB1P19838 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.22□□□□□ -1.41
NFKB1P19838 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 AC005225.5-201ENST00000623547 2225 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.22□□□□□ -1.41
NFKB1P19838 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
NFKB1P19838 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 MTND4P14-201ENST00000435799 1354 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 PPBPP2-201ENST00000513150 1362 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.22□□□□□ -1.41
NFKB1P19838 AC034229.2-201ENST00000566945 2508 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.22□□□□□ -1.41
NFKB1P19838 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.22□□□□□ -1.41
NFKB1P19838 AC127526.1-201ENST00000417526 366 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 AC234782.4-201ENST00000417646 1048 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 AL451054.2-201ENST00000420896 202 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.22□□□□□ -1.41
NFKB1P19838 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.22□□□□□ -1.41
NFKB1P19838 RPL23AP30-201ENST00000432419 501 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 AL356010.1-201ENST00000456364 102 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 AC026410.2-201ENST00000460281 156 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 AC007547.1-201ENST00000462177 490 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.22□□□□□ -1.41
NFKB1P19838 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.22□□□□□ -1.41
NFKB1P19838 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.22□□□□□ -1.41
NFKB1P19838 RNA5SP434-201ENST00000516647 121 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 RNU6-1220P-201ENST00000517126 108 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 SNORA25.17-201ENST00000517184 124 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC6.22□□□□□ -1.41
NFKB1P19838 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.22□□□□□ -1.41
NFKB1P19838 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.22□□□□□ -1.41
NFKB1P19838 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.22□□□□□ -1.41
NFKB1P19838 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.22□□□□□ -1.41
NFKB1P19838 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC6.22□□□□□ -1.41
NFKB1P19838 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.22□□□□□ -1.41
NFKB1P19838 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.22□□□□□ -1.41
NFKB1P19838 MAGOH2P-202ENST00000584384 429 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 GLYATL1P2-202ENST00000588046 902 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC6.22□□□□□ -1.41
NFKB1P19838 AC011500.1-201ENST00000601963 469 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 AC010680.4-201ENST00000605334 543 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 AL022345.1-201ENST00000607292 135 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
NFKB1P19838 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NFKB1P19838 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.22□□□□□ -1.41
NFKB1P19838 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.22□□□□□ -1.41
NFKB1P19838 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NFKB1P19838 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
NFKB1P19838 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
NFKB1P19838 AC022325.1-201ENST00000502748 2199 ntBASIC6.21□□□□□ -1.41
NFKB1P19838 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.21□□□□□ -1.41
NFKB1P19838 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
NFKB1P19838 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
NFKB1P19838 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
NFKB1P19838 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.21□□□□□ -1.41
NFKB1P19838 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NFKB1P19838 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NFKB1P19838 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NFKB1P19838 AC105074.1-201ENST00000623380 3095 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.21□□□□□ -1.42
NFKB1P19838 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.21□□□□□ -1.42
NFKB1P19838 RNA5SP110-201ENST00000362638 115 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 RN7SKP250-201ENST00000363924 321 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 RNU6-1318P-201ENST00000365389 103 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 SNORA22B-201ENST00000383876 138 ntBASIC6.21□□□□□ -1.42
NFKB1P19838 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
NFKB1P19838 AL121835.1-201ENST00000404250 354 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms