Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.39□□□□□ -1.71
ERCC2P18074 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC2P18074 KRT19P6-201ENST00000510983 209 ntBASIC4.39□□□□□ -1.71
ERCC2P18074 AC093840.1-201ENST00000511599 336 ntBASIC4.39□□□□□ -1.71
ERCC2P18074 RNA5SP49-201ENST00000516450 115 ntBASIC4.39□□□□□ -1.71
ERCC2P18074 RNA5SP519-201ENST00000516480 119 ntBASIC4.39□□□□□ -1.71
ERCC2P18074 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.39□□□□□ -1.71
ERCC2P18074 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.39□□□□□ -1.71
ERCC2P18074 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC2P18074 AL121834.1-201ENST00000572284 509 ntBASIC4.39□□□□□ -1.71
ERCC2P18074 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.39□□□□□ -1.71
ERCC2P18074 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.39□□□□□ -1.71
ERCC2P18074 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.39□□□□□ -1.71
ERCC2P18074 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.39□□□□□ -1.71
ERCC2P18074 AC010872.1-201ENST00000624225 675 ntBASIC4.39□□□□□ -1.71
ERCC2P18074 AC011944.2-201ENST00000624440 683 ntBASIC4.39□□□□□ -1.71
ERCC2P18074 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.39□□□□□ -1.71
ERCC2P18074 AC139713.2-210ENST00000641741 992 ntBASIC4.39□□□□□ -1.71
ERCC2P18074 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC2P18074 ERCC6-202ENST00000374127 1782 ntBASIC4.39□□□□□ -1.71
ERCC2P18074 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC2P18074 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ERCC2P18074 AC010300.1-201ENST00000600671 5134 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
ERCC2P18074 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC2P18074 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC2P18074 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
ERCC2P18074 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
ERCC2P18074 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.38□□□□□ -1.71
ERCC2P18074 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
ERCC2P18074 RNU1-132P-201ENST00000364300 164 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 RNU6-1257P-201ENST00000384625 110 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 RNU6-1151P-201ENST00000384684 107 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 MCTS2P-201ENST00000394552 546 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.38□□□□□ -1.71
ERCC2P18074 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.38□□□□□ -1.71
ERCC2P18074 AC012497.1-201ENST00000429392 575 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 AC234064.1-201ENST00000436312 247 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.38□□□□□ -1.71
ERCC2P18074 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.38□□□□□ -1.71
ERCC2P18074 AL592437.1-201ENST00000443781 492 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.38□□□□□ -1.71
ERCC2P18074 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.38□□□□□ -1.71
ERCC2P18074 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.38□□□□□ -1.71
ERCC2P18074 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.38□□□□□ -1.71
ERCC2P18074 snoU13.7-201ENST00000459220 104 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 RPL37P6-202ENST00000464216 403 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 RPS20P21-201ENST00000466859 343 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC2P18074 RN7SL303P-201ENST00000469773 251 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC2P18074 AL592156.1-201ENST00000508758 304 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC2P18074 PPBPP1-201ENST00000510807 373 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 AC008958.1-201ENST00000511047 682 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 NDUFB4P12-201ENST00000513465 390 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 RNU6-202P-201ENST00000515998 96 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.38□□□□□ -1.71
ERCC2P18074 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.38□□□□□ -1.71
ERCC2P18074 C1GALT1P3-201ENST00000522049 819 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC2P18074 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC2P18074 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC2P18074 PTP4A1P6-201ENST00000531034 478 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC2P18074 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.38□□□□□ -1.71
ERCC2P18074 PSMB7P1-201ENST00000556349 514 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.38□□□□□ -1.71
ERCC2P18074 AC017100.2-201ENST00000584628 355 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 VN1R87P-201ENST00000596706 487 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.38□□□□□ -1.71
ERCC2P18074 AL020997.3-201ENST00000602843 359 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 FAM27D1-201ENST00000612308 341 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.38□□□□□ -1.71
ERCC2P18074 AL049777.1-201ENST00000622740 518 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
ERCC2P18074 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC2P18074 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC2P18074 AC090229.1-201ENST00000590983 1609 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
ERCC2P18074 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC2P18074 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC2P18074 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC2P18074 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ERCC2P18074 MFSD8-220ENST00000641243 1422 ntBASIC4.38□□□□□ -1.71
ERCC2P18074 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERCC2P18074 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ERCC2P18074 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERCC2P18074 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERCC2P18074 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ERCC2P18074 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERCC2P18074 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERCC2P18074 RNU6-984P-201ENST00000363236 109 ntBASIC4.37□□□□□ -1.71
ERCC2P18074 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
ERCC2P18074 RNU6-549P-201ENST00000384433 107 ntBASIC4.37□□□□□ -1.71
ERCC2P18074 RNU4-25P-201ENST00000410569 230 ntBASIC4.37□□□□□ -1.71
ERCC2P18074 AC096533.1-201ENST00000411645 353 ntBASIC4.37□□□□□ -1.71
ERCC2P18074 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.37□□□□□ -1.71
ERCC2P18074 NUP35P2-201ENST00000416748 943 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms