Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RNU6-98P-201ENST00000384173 107 ntBASIC4.79□□□□□ -1.64
MMP3P08254 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MMP3P08254 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.79□□□□□ -1.64
MMP3P08254 RN7SKP182-201ENST00000410772 298 ntBASIC4.79□□□□□ -1.64
MMP3P08254 RNA5SP498-201ENST00000411342 120 ntBASIC4.79□□□□□ -1.64
MMP3P08254 CEACAMP8-201ENST00000413902 580 ntBASIC4.79□□□□□ -1.64
MMP3P08254 TCEA1P4-201ENST00000415066 844 ntBASIC4.79□□□□□ -1.64
MMP3P08254 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.79□□□□□ -1.64
MMP3P08254 AL389915.1-201ENST00000422463 466 ntBASIC4.79□□□□□ -1.64
MMP3P08254 OR6K4P-201ENST00000423179 955 ntBASIC4.79□□□□□ -1.64
MMP3P08254 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.79□□□□□ -1.64
MMP3P08254 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.79□□□□□ -1.64
MMP3P08254 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.79□□□□□ -1.64
MMP3P08254 NANOGP2-201ENST00000435391 727 ntBASIC4.79□□□□□ -1.64
MMP3P08254 HMGB1P45-201ENST00000435986 653 ntBASIC4.79□□□□□ -1.64
MMP3P08254 RPL7P29-201ENST00000437151 728 ntBASIC4.79□□□□□ -1.64
MMP3P08254 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.79□□□□□ -1.64
MMP3P08254 RPS26P2-201ENST00000440331 348 ntBASIC4.79□□□□□ -1.64
MMP3P08254 EEF1A1P39-201ENST00000440791 250 ntBASIC4.79□□□□□ -1.64
MMP3P08254 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.79□□□□□ -1.64
MMP3P08254 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.79□□□□□ -1.64
MMP3P08254 RPL23AP37-201ENST00000479658 549 ntBASIC4.79□□□□□ -1.64
MMP3P08254 RN7SL604P-201ENST00000492589 296 ntBASIC4.79□□□□□ -1.64
MMP3P08254 RPS4XP18-201ENST00000495480 763 ntBASIC4.79□□□□□ -1.64
MMP3P08254 SAP18P1-201ENST00000512058 390 ntBASIC4.79□□□□□ -1.64
MMP3P08254 AC108064.1-201ENST00000513791 460 ntBASIC4.79□□□□□ -1.64
MMP3P08254 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.79□□□□□ -1.64
MMP3P08254 MRPS36P3-201ENST00000519284 130 ntBASIC4.79□□□□□ -1.64
MMP3P08254 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.79□□□□□ -1.64
MMP3P08254 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.79□□□□□ -1.64
MMP3P08254 AC083923.1-201ENST00000523708 376 ntBASIC4.79□□□□□ -1.64
MMP3P08254 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.79□□□□□ -1.64
MMP3P08254 OR4A2P-201ENST00000527276 913 ntBASIC4.79□□□□□ -1.64
MMP3P08254 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.79□□□□□ -1.64
MMP3P08254 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.79□□□□□ -1.64
MMP3P08254 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.79□□□□□ -1.64
MMP3P08254 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.79□□□□□ -1.64
MMP3P08254 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.79□□□□□ -1.64
MMP3P08254 NPM1P47-201ENST00000560843 856 ntBASIC4.79□□□□□ -1.64
MMP3P08254 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.79□□□□□ -1.64
MMP3P08254 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
MMP3P08254 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.79□□□□□ -1.64
MMP3P08254 AC022884.3-201ENST00000579571 248 ntBASIC4.79□□□□□ -1.64
MMP3P08254 MIR4429-201ENST00000580105 73 ntBASIC4.79□□□□□ -1.64
MMP3P08254 AC015688.2-201ENST00000584523 262 ntBASIC4.79□□□□□ -1.64
MMP3P08254 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
MMP3P08254 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.79□□□□□ -1.64
MMP3P08254 AC245389.1-201ENST00000605141 529 ntBASIC4.79□□□□□ -1.64
MMP3P08254 IMMP1LP1-201ENST00000605170 488 ntBASIC4.79□□□□□ -1.64
MMP3P08254 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.79□□□□□ -1.64
MMP3P08254 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.79□□□□□ -1.64
MMP3P08254 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.79□□□□□ -1.64
MMP3P08254 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
MMP3P08254 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.79□□□□□ -1.64
MMP3P08254 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
MMP3P08254 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
MMP3P08254 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
MMP3P08254 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
MMP3P08254 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MMP3P08254 AC073055.1-201ENST00000456901 1621 ntBASIC4.79□□□□□ -1.64
MMP3P08254 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MMP3P08254 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
MMP3P08254 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MMP3P08254 MTND4P8-201ENST00000514997 1362 ntBASIC4.78□□□□□ -1.64
MMP3P08254 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MMP3P08254 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MMP3P08254 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MMP3P08254 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MMP3P08254 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.78□□□□□ -1.64
MMP3P08254 AL672167.1-205ENST00000641112 3080 ntBASIC4.78□□□□□ -1.64
MMP3P08254 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
MMP3P08254 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MMP3P08254 ANKRD36P1-201ENST00000344424 659 ntBASIC4.78□□□□□ -1.64
MMP3P08254 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
MMP3P08254 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
MMP3P08254 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MMP3P08254 AC009237.10-201ENST00000414112 510 ntBASIC4.78□□□□□ -1.64
MMP3P08254 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.78□□□□□ -1.64
MMP3P08254 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.78□□□□□ -1.64
MMP3P08254 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.78□□□□□ -1.64
MMP3P08254 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.78□□□□□ -1.64
MMP3P08254 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.78□□□□□ -1.64
MMP3P08254 AC010099.3-201ENST00000423896 409 ntBASIC4.78□□□□□ -1.64
MMP3P08254 RAC1P8-201ENST00000427086 527 ntBASIC4.78□□□□□ -1.64
MMP3P08254 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.78□□□□□ -1.64
MMP3P08254 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.78□□□□□ -1.64
MMP3P08254 RPL21P89-201ENST00000444021 467 ntBASIC4.78□□□□□ -1.64
MMP3P08254 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.78□□□□□ -1.64
MMP3P08254 RPL7L1P1-201ENST00000448259 785 ntBASIC4.78□□□□□ -1.64
MMP3P08254 AL589880.1-201ENST00000448271 287 ntBASIC4.78□□□□□ -1.64
MMP3P08254 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MMP3P08254 RPL5P32-201ENST00000454085 879 ntBASIC4.78□□□□□ -1.64
MMP3P08254 VN1R40P-201ENST00000455196 941 ntBASIC4.78□□□□□ -1.64
MMP3P08254 RPL23AP81-201ENST00000455252 467 ntBASIC4.78□□□□□ -1.64
MMP3P08254 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MMP3P08254 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MMP3P08254 RPL7P22-201ENST00000466005 733 ntBASIC4.78□□□□□ -1.64
MMP3P08254 AC034236.1-201ENST00000469891 373 ntBASIC4.78□□□□□ -1.64
MMP3P08254 AC104687.1-201ENST00000485829 412 ntBASIC4.78□□□□□ -1.64
MMP3P08254 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms