Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL049781.1-201ENST00000623195 3585 ntBASIC3.52□□□□□ -1.85
TNFP01375 PRO1804-201ENST00000623780 2050 ntBASIC3.51□□□□□ -1.85
TNFP01375 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
TNFP01375 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.51□□□□□ -1.85
TNFP01375 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TNFP01375 AC233968.1-201ENST00000611212 1300 ntBASIC3.51□□□□□ -1.85
TNFP01375 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TNFP01375 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.51□□□□□ -1.85
TNFP01375 NCSTNP1-201ENST00000406229 144 ntBASIC3.51□□□□□ -1.85
TNFP01375 SAGE2P-201ENST00000420011 2126 ntBASIC3.51□□□□□ -1.85
TNFP01375 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.51□□□□□ -1.85
TNFP01375 NDUFB1P1-201ENST00000435191 180 ntBASIC3.51□□□□□ -1.85
TNFP01375 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.51□□□□□ -1.85
TNFP01375 SNRPFP2-201ENST00000440710 251 ntBASIC3.51□□□□□ -1.85
TNFP01375 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.51□□□□□ -1.85
TNFP01375 RPL21P10-201ENST00000463521 490 ntBASIC3.51□□□□□ -1.85
TNFP01375 PLGLA-201ENST00000465668 449 ntBASIC3.51□□□□□ -1.85
TNFP01375 RPL32P34-201ENST00000486380 400 ntBASIC3.51□□□□□ -1.85
TNFP01375 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFP01375 WBP1LP4-201ENST00000505043 344 ntBASIC3.51□□□□□ -1.85
TNFP01375 AC109458.1-201ENST00000508858 316 ntBASIC3.51□□□□□ -1.85
TNFP01375 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFP01375 AC018797.3-201ENST00000513388 1241 ntBASIC3.51□□□□□ -1.85
TNFP01375 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFP01375 AC092747.2-201ENST00000545069 983 ntBASIC3.51□□□□□ -1.85
TNFP01375 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TNFP01375 AC005412.1-201ENST00000580812 1049 ntBASIC3.51□□□□□ -1.85
TNFP01375 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.51□□□□□ -1.85
TNFP01375 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFP01375 AC012468.1-201ENST00000604888 430 ntBASIC3.51□□□□□ -1.85
TNFP01375 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.51□□□□□ -1.85
TNFP01375 AC243654.2-201ENST00000612843 443 ntBASIC3.51□□□□□ -1.85
TNFP01375 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.51□□□□□ -1.85
TNFP01375 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TNFP01375 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TNFP01375 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TNFP01375 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TNFP01375 AC090971.4-201ENST00000560291 1800 ntBASIC3.51□□□□□ -1.85
TNFP01375 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TNFP01375 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TNFP01375 RLIMP2-201ENST00000427891 1563 ntBASIC3.51□□□□□ -1.85
TNFP01375 HSPA8P17-201ENST00000427029 1382 ntBASIC3.51□□□□□ -1.85
TNFP01375 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TNFP01375 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TNFP01375 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TNFP01375 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TNFP01375 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TNFP01375 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFP01375 AC009302.1-201ENST00000417147 390 ntBASIC3.5□□□□□ -1.85
TNFP01375 KRR1P1-201ENST00000419430 803 ntBASIC3.5□□□□□ -1.85
TNFP01375 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFP01375 AC104978.1-201ENST00000449387 391 ntBASIC3.5□□□□□ -1.85
TNFP01375 PPIAP3-201ENST00000450588 505 ntBASIC3.5□□□□□ -1.85
TNFP01375 NDUFS5P3-201ENST00000450668 321 ntBASIC3.5□□□□□ -1.85
TNFP01375 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFP01375 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFP01375 RPS26P15-201ENST00000488067 348 ntBASIC3.5□□□□□ -1.85
TNFP01375 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.5□□□□□ -1.85
TNFP01375 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFP01375 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TNFP01375 AC026784.1-201ENST00000507986 352 ntBASIC3.5□□□□□ -1.85
TNFP01375 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TNFP01375 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFP01375 IGLVIV-53-201ENST00000520107 367 ntBASIC3.5□□□□□ -1.85
TNFP01375 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFP01375 AC011611.1-201ENST00000552179 197 ntBASIC3.5□□□□□ -1.85
TNFP01375 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFP01375 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFP01375 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFP01375 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFP01375 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.5□□□□□ -1.85
TNFP01375 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFP01375 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFP01375 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
TNFP01375 AC023813.4-201ENST00000607580 580 ntBASIC3.5□□□□□ -1.85
TNFP01375 AL355365.1-201ENST00000616480 294 ntBASIC3.5□□□□□ -1.85
TNFP01375 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFP01375 U4.6-201ENST00000621618 127 ntBASIC3.5□□□□□ -1.85
TNFP01375 MIR6715B-201ENST00000637172 77 ntBASIC3.5□□□□□ -1.85
TNFP01375 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TNFP01375 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TNFP01375 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFP01375 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
TNFP01375 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TNFP01375 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFP01375 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFP01375 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TNFP01375 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
TNFP01375 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFP01375 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFP01375 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFP01375 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFP01375 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFP01375 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFP01375 AC011155.1-201ENST00000316512 456 ntBASIC3.49□□□□□ -1.85
TNFP01375 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFP01375 DBIP2-201ENST00000419076 262 ntBASIC3.49□□□□□ -1.85
TNFP01375 AP000907.1-201ENST00000428428 510 ntBASIC3.49□□□□□ -1.85
TNFP01375 AC097713.2-201ENST00000430199 356 ntBASIC3.49□□□□□ -1.85
TNFP01375 RPL7P4-203ENST00000430239 730 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms