Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MBD4O95243 LINC01355-201ENST00000566551 5444 ntBASIC5.08□□□□□ -1.6
MBD4O95243 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
MBD4O95243 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.08□□□□□ -1.6
MBD4O95243 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MBD4O95243 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MBD4O95243 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
MBD4O95243 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MBD4O95243 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.08□□□□□ -1.6
MBD4O95243 CEACAMP8-201ENST00000413902 580 ntBASIC5.08□□□□□ -1.6
MBD4O95243 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.08□□□□□ -1.6
MBD4O95243 UBTFL3-201ENST00000418934 1024 ntBASIC5.08□□□□□ -1.6
MBD4O95243 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.08□□□□□ -1.6
MBD4O95243 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.08□□□□□ -1.6
MBD4O95243 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.08□□□□□ -1.6
MBD4O95243 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.08□□□□□ -1.6
MBD4O95243 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.08□□□□□ -1.6
MBD4O95243 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.08□□□□□ -1.6
MBD4O95243 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.08□□□□□ -1.6
MBD4O95243 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.08□□□□□ -1.6
MBD4O95243 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MBD4O95243 AC091959.2-201ENST00000477363 321 ntBASIC5.08□□□□□ -1.6
MBD4O95243 UBTFL6-201ENST00000477929 1024 ntBASIC5.08□□□□□ -1.6
MBD4O95243 AF213884.1-201ENST00000488102 463 ntBASIC5.08□□□□□ -1.6
MBD4O95243 AC008427.1-201ENST00000503102 655 ntBASIC5.08□□□□□ -1.6
MBD4O95243 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.08□□□□□ -1.6
MBD4O95243 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.08□□□□□ -1.6
MBD4O95243 AC113430.1-201ENST00000506872 718 ntBASIC5.08□□□□□ -1.6
MBD4O95243 AC110792.2-201ENST00000510278 224 ntBASIC5.08□□□□□ -1.6
MBD4O95243 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.08□□□□□ -1.6
MBD4O95243 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.08□□□□□ -1.6
MBD4O95243 AC074029.1-201ENST00000552531 1044 ntBASIC5.08□□□□□ -1.6
MBD4O95243 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.08□□□□□ -1.6
MBD4O95243 AC008759.1-201ENST00000589783 983 ntBASIC5.08□□□□□ -1.6
MBD4O95243 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.08□□□□□ -1.6
MBD4O95243 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.08□□□□□ -1.6
MBD4O95243 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MBD4O95243 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.08□□□□□ -1.6
MBD4O95243 AL512427.1-201ENST00000618593 349 ntBASIC5.08□□□□□ -1.6
MBD4O95243 AC068831.8-201ENST00000620171 435 ntBASIC5.08□□□□□ -1.6
MBD4O95243 AC019278.1-201ENST00000623516 479 ntBASIC5.08□□□□□ -1.6
MBD4O95243 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.08□□□□□ -1.6
MBD4O95243 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MBD4O95243 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
MBD4O95243 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MBD4O95243 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
MBD4O95243 AC025263.3-201ENST00000622965 1396 ntBASIC5.07□□□□□ -1.6
MBD4O95243 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.07□□□□□ -1.6
MBD4O95243 MTND4P9-201ENST00000507819 1346 ntBASIC5.07□□□□□ -1.6
MBD4O95243 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.07□□□□□ -1.6
MBD4O95243 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
MBD4O95243 RNU1-94P-201ENST00000362627 173 ntBASIC5.07□□□□□ -1.6
MBD4O95243 RNU6-1000P-201ENST00000391066 106 ntBASIC5.07□□□□□ -1.6
MBD4O95243 RN7SKP182-201ENST00000410772 298 ntBASIC5.07□□□□□ -1.6
MBD4O95243 RNU6-272P-201ENST00000411028 104 ntBASIC5.07□□□□□ -1.6
MBD4O95243 TAF13P2-201ENST00000416876 286 ntBASIC5.07□□□□□ -1.6
MBD4O95243 AC004448.2-201ENST00000422360 586 ntBASIC5.07□□□□□ -1.6
MBD4O95243 COX6CP15-201ENST00000426313 211 ntBASIC5.07□□□□□ -1.6
MBD4O95243 AL009174.1-201ENST00000426577 416 ntBASIC5.07□□□□□ -1.6
MBD4O95243 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.07□□□□□ -1.6
MBD4O95243 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.07□□□□□ -1.6
MBD4O95243 AC004865.1-201ENST00000442276 1003 ntBASIC5.07□□□□□ -1.6
MBD4O95243 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.07□□□□□ -1.6
MBD4O95243 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.07□□□□□ -1.6
MBD4O95243 RNU7-140P-201ENST00000459546 60 ntBASIC5.07□□□□□ -1.6
MBD4O95243 RPS29P19-201ENST00000479709 171 ntBASIC5.07□□□□□ -1.6
MBD4O95243 RN7SL817P-201ENST00000480777 288 ntBASIC5.07□□□□□ -1.6
MBD4O95243 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.07□□□□□ -1.6
MBD4O95243 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.07□□□□□ -1.6
MBD4O95243 OR5H4P-201ENST00000510851 923 ntBASIC5.07□□□□□ -1.6
MBD4O95243 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.07□□□□□ -1.6
MBD4O95243 AC119751.1-201ENST00000513357 765 ntBASIC5.07□□□□□ -1.6
MBD4O95243 AC099522.1-202ENST00000514718 367 ntBASIC5.07□□□□□ -1.6
MBD4O95243 AC134698.5-201ENST00000519444 336 ntBASIC5.07□□□□□ -1.6
MBD4O95243 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.07□□□□□ -1.6
MBD4O95243 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MBD4O95243 AC105233.3-201ENST00000531125 744 ntBASIC5.07□□□□□ -1.6
MBD4O95243 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.07□□□□□ -1.6
MBD4O95243 DYNLL1P4-201ENST00000549314 266 ntBASIC5.07□□□□□ -1.6
MBD4O95243 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.07□□□□□ -1.6
MBD4O95243 AL161713.1-201ENST00000555538 145 ntBASIC5.07□□□□□ -1.6
MBD4O95243 MTCO1P40-201ENST00000574371 625 ntBASIC5.07□□□□□ -1.6
MBD4O95243 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.07□□□□□ -1.6
MBD4O95243 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.07□□□□□ -1.6
MBD4O95243 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.07□□□□□ -1.6
MBD4O95243 AC006116.5-201ENST00000591936 559 ntBASIC5.07□□□□□ -1.6
MBD4O95243 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.07□□□□□ -1.6
MBD4O95243 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.07□□□□□ -1.6
MBD4O95243 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.07□□□□□ -1.6
MBD4O95243 AL591034.3-201ENST00000605511 685 ntBASIC5.07□□□□□ -1.6
MBD4O95243 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
MBD4O95243 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.07□□□□□ -1.6
MBD4O95243 AP006248.2-201ENST00000623309 592 ntBASIC5.07□□□□□ -1.6
MBD4O95243 AL121594.5-201ENST00000631724 573 ntBASIC5.07□□□□□ -1.6
MBD4O95243 AC139713.2-210ENST00000641741 992 ntBASIC5.07□□□□□ -1.6
MBD4O95243 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.07□□□□□ -1.6
MBD4O95243 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.07□□□□□ -1.6
MBD4O95243 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
MBD4O95243 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MBD4O95243 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms