Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX2-2O95096 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-2O95096 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX2-2O95096 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-2O95096 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-2O95096 OR4A15-201ENST00000314706 1035 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AL590240.1-201ENST00000334118 313 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 RNU6-921P-201ENST00000384361 107 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 RNU6-441P-201ENST00000384545 106 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 Z98745.1-201ENST00000402553 494 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX2-2O95096 RPL23AP47-201ENST00000408017 460 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AL008987.1-201ENST00000415528 237 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-2O95096 MTATP6P17-201ENST00000431030 672 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-2O95096 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-2O95096 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX2-2O95096 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX2-2O95096 FGF7P5-201ENST00000441829 291 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX2-2O95096 RPL36AP15-201ENST00000444514 266 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 Z80107.2-201ENST00000445127 392 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 RPL21P134-201ENST00000453468 483 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AL645937.3-201ENST00000453647 936 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 ISCUP1-201ENST00000454451 448 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 SCARNA10-201ENST00000459255 330 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AC087879.1-201ENST00000474343 374 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 RPL5P22-201ENST00000480199 884 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 MTND2P14-201ENST00000482139 351 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 KLRA1P-201ENST00000503499 986 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-2O95096 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX2-2O95096 OR7H2P-201ENST00000513483 306 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 C1GALT1P3-201ENST00000522049 819 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AC023538.1-201ENST00000534576 736 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.29□□□□□ -1.72
NKX2-2O95096 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.29□□□□□ -1.72
NKX2-2O95096 AC051619.2-201ENST00000559063 397 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AP005119.2-201ENST00000579735 1105 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AC067852.4-201ENST00000590314 478 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX2-2O95096 AC008536.1-201ENST00000602872 669 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AC073091.2-201ENST00000603205 907 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AP003392.5-201ENST00000607857 415 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 SNORD91B-202ENST00000608459 222 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 FAM25E-202ENST00000608562 189 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AC005332.6-201ENST00000613178 446 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AC098679.5-201ENST00000624394 571 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.29□□□□□ -1.72
NKX2-2O95096 U3.53-201ENST00000628922 216 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-2O95096 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-2O95096 AL139811.1-201ENST00000424779 2299 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 AL672167.1-205ENST00000641112 3080 ntBASIC4.29□□□□□ -1.72
NKX2-2O95096 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-2O95096 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-2O95096 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NKX2-2O95096 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX2-2O95096 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-2O95096 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-2O95096 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX2-2O95096 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.28□□□□□ -1.72
NKX2-2O95096 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-2O95096 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
NKX2-2O95096 PCAT14-202ENST00000627127 3935 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 KARSP3-201ENST00000571212 1504 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 RN7SKP74-201ENST00000362849 309 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 SNORD113-6-201ENST00000363345 75 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-2O95096 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NKX2-2O95096 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AC005005.2-201ENST00000420779 380 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 MTCO3P1-205ENST00000422088 832 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX2-2O95096 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.28□□□□□ -1.72
NKX2-2O95096 NPM1P34-201ENST00000428821 893 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX2-2O95096 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
NKX2-2O95096 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-2O95096 RPL7P31-201ENST00000450192 724 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX2-2O95096 NECAP1P2-201ENST00000455668 727 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AC104763.1-201ENST00000475274 360 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AC083982.1-201ENST00000485679 344 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 ACTG1P13-201ENST00000486987 1043 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 RPS4XP18-201ENST00000495480 763 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AC105233.1-201ENST00000498840 781 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 WBP1LP4-201ENST00000505043 344 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 SNX5P1-201ENST00000505757 1041 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.28□□□□□ -1.72
NKX2-2O95096 PGBD4P4-201ENST00000509673 613 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AC007016.1-201ENST00000512110 244 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 RNU6-1261P-201ENST00000517194 104 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.28□□□□□ -1.72
NKX2-2O95096 MTND2P26-201ENST00000528255 1029 ntBASIC4.28□□□□□ -1.72
NKX2-2O95096 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-2O95096 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms