Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.23□□□□□ -1.73
ZIC3O60481 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.23□□□□□ -1.73
ZIC3O60481 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.23□□□□□ -1.73
ZIC3O60481 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.23□□□□□ -1.73
ZIC3O60481 OR4K7P-201ENST00000580232 945 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 PIGPP4-201ENST00000584447 307 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.23□□□□□ -1.73
ZIC3O60481 AC009220.3-201ENST00000604318 586 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 AC106791.2-201ENST00000604680 391 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 AC121247.2-201ENST00000604776 136 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.23□□□□□ -1.73
ZIC3O60481 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.23□□□□□ -1.73
ZIC3O60481 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.23□□□□□ -1.73
ZIC3O60481 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.23□□□□□ -1.73
ZIC3O60481 OR8B1P-202ENST00000641132 1178 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 AL031119.1-201ENST00000404707 1879 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 DHX9P1-201ENST00000436565 3076 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.23□□□□□ -1.73
ZIC3O60481 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.23□□□□□ -1.73
ZIC3O60481 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 AC093591.2-201ENST00000565254 3843 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.23□□□□□ -1.73
ZIC3O60481 AL359922.3-201ENST00000624779 1670 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.22□□□□□ -1.73
ZIC3O60481 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
ZIC3O60481 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.22□□□□□ -1.73
ZIC3O60481 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZIC3O60481 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.22□□□□□ -1.73
ZIC3O60481 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZIC3O60481 OR4K15-201ENST00000305051 1216 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 RNU5D-1-201ENST00000363299 116 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 SNORD113.2-201ENST00000364166 89 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZIC3O60481 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZIC3O60481 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZIC3O60481 RNU2-42P-201ENST00000410697 113 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 RPL6P29-201ENST00000414863 865 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.22□□□□□ -1.73
ZIC3O60481 AC009237.2-201ENST00000421358 284 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 AC009965.2-201ENST00000425328 970 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.22□□□□□ -1.73
ZIC3O60481 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.22□□□□□ -1.73
ZIC3O60481 MTCYBP3-201ENST00000445588 1137 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.22□□□□□ -1.73
ZIC3O60481 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.22□□□□□ -1.73
ZIC3O60481 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.22□□□□□ -1.73
ZIC3O60481 NF1P3-201ENST00000457709 450 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 RPS4XP12-201ENST00000461747 709 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.22□□□□□ -1.73
ZIC3O60481 RN7SL354P-201ENST00000469282 294 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 RPL36AP41-201ENST00000493820 306 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 AC025164.1-201ENST00000496249 478 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZIC3O60481 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ZIC3O60481 MTND1P22-201ENST00000510572 951 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.22□□□□□ -1.73
ZIC3O60481 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.22□□□□□ -1.73
ZIC3O60481 OR5AN2P-201ENST00000534535 896 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
ZIC3O60481 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.22□□□□□ -1.73
ZIC3O60481 MIR4472-2-201ENST00000582069 67 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 RN7SL52P-201ENST00000584271 284 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 MIR3936-201ENST00000584304 110 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.22□□□□□ -1.73
ZIC3O60481 AC008687.2-201ENST00000597865 520 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 AC110760.3-201ENST00000598794 467 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 AL592221.1-201ENST00000605266 382 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 AC064807.4-201ENST00000607201 407 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.22□□□□□ -1.73
ZIC3O60481 MIR6820-201ENST00000611508 62 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 RN7SL722P-201ENST00000617780 284 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 RN7SL565P-201ENST00000618246 284 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 AC079248.2-201ENST00000623779 326 ntBASIC4.22□□□□□ -1.73
ZIC3O60481 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
ZIC3O60481 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZIC3O60481 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZIC3O60481 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ZIC3O60481 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.22□□□□□ -1.73
ZIC3O60481 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZIC3O60481 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZIC3O60481 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ZIC3O60481 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZIC3O60481 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.22□□□□□ -1.73
ZIC3O60481 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.22□□□□□ -1.73
ZIC3O60481 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZIC3O60481 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZIC3O60481 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.73
ZIC3O60481 AL136164.3-201ENST00000624429 3978 ntBASIC4.21□□□□□ -1.73
ZIC3O60481 DHX40P1-201ENST00000588725 1412 ntBASIC4.21□□□□□ -1.73
ZIC3O60481 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ZIC3O60481 KARSP3-201ENST00000571212 1504 ntBASIC4.21□□□□□ -1.73
ZIC3O60481 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
ZIC3O60481 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms