Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PRKNO60260 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKNO60260 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKNO60260 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKNO60260 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PRKNO60260 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 AL731566.1-201ENST00000620490 1937 ntBASIC4.11□□□□□ -1.75
PRKNO60260 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.11□□□□□ -1.75
PRKNO60260 AL450326.2-201ENST00000421913 1962 ntBASIC4.11□□□□□ -1.75
PRKNO60260 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PRKNO60260 AC008079.2-201ENST00000623543 20396 ntBASIC4.11□□□□□ -1.75
PRKNO60260 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 NACA3P-201ENST00000359690 648 ntBASIC4.11□□□□□ -1.75
PRKNO60260 RNU4-40P-201ENST00000364351 143 ntBASIC4.11□□□□□ -1.75
PRKNO60260 RNA5SP509-201ENST00000364577 119 ntBASIC4.11□□□□□ -1.75
PRKNO60260 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PRKNO60260 MIR921-201ENST00000401133 56 ntBASIC4.11□□□□□ -1.75
PRKNO60260 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.11□□□□□ -1.75
PRKNO60260 ERHP2-201ENST00000402323 299 ntBASIC4.11□□□□□ -1.75
PRKNO60260 NRBF2P2-201ENST00000413087 861 ntBASIC4.11□□□□□ -1.75
PRKNO60260 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.11□□□□□ -1.75
PRKNO60260 OR5AW1P-201ENST00000426334 1006 ntBASIC4.11□□□□□ -1.75
PRKNO60260 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.11□□□□□ -1.75
PRKNO60260 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 SETP8-201ENST00000435341 628 ntBASIC4.11□□□□□ -1.75
PRKNO60260 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 FGF7P5-201ENST00000441829 291 ntBASIC4.11□□□□□ -1.75
PRKNO60260 TPTE2P6-202ENST00000445572 1007 ntBASIC4.11□□□□□ -1.75
PRKNO60260 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 AL031584.1-201ENST00000447169 754 ntBASIC4.11□□□□□ -1.75
PRKNO60260 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.11□□□□□ -1.75
PRKNO60260 MRPL35P4-201ENST00000453682 566 ntBASIC4.11□□□□□ -1.75
PRKNO60260 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.11□□□□□ -1.75
PRKNO60260 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 CYCSP34-201ENST00000458172 304 ntBASIC4.11□□□□□ -1.75
PRKNO60260 RPL5P23-201ENST00000496040 868 ntBASIC4.11□□□□□ -1.75
PRKNO60260 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 AC138938.1-201ENST00000515431 782 ntBASIC4.11□□□□□ -1.75
PRKNO60260 AC023632.1-201ENST00000518463 375 ntBASIC4.11□□□□□ -1.75
PRKNO60260 IGJP1-201ENST00000522682 475 ntBASIC4.11□□□□□ -1.75
PRKNO60260 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 AC007834.2-201ENST00000536310 343 ntBASIC4.11□□□□□ -1.75
PRKNO60260 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 OSBPL9P5-201ENST00000542581 171 ntBASIC4.11□□□□□ -1.75
PRKNO60260 DUXAP6-201ENST00000553858 601 ntBASIC4.11□□□□□ -1.75
PRKNO60260 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.11□□□□□ -1.75
PRKNO60260 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 AC114878.2-201ENST00000604863 1251 ntBASIC4.11□□□□□ -1.75
PRKNO60260 AP002360.3-201ENST00000607673 710 ntBASIC4.11□□□□□ -1.75
PRKNO60260 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 MIR7973-1-201ENST00000614683 76 ntBASIC4.11□□□□□ -1.75
PRKNO60260 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.11□□□□□ -1.75
PRKNO60260 AL445437.1-201ENST00000623157 3087 ntBASIC4.11□□□□□ -1.75
PRKNO60260 AC090017.1-201ENST00000548612 1779 ntBASIC4.11□□□□□ -1.75
PRKNO60260 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.11□□□□□ -1.75
PRKNO60260 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 DDX18P4-201ENST00000511690 1966 ntBASIC4.11□□□□□ -1.75
PRKNO60260 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PRKNO60260 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.11□□□□□ -1.75
PRKNO60260 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.11□□□□□ -1.75
PRKNO60260 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PRKNO60260 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRKNO60260 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRKNO60260 AC093535.2-201ENST00000624769 2326 ntBASIC4.1□□□□□ -1.75
PRKNO60260 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
PRKNO60260 BX005019.1-201ENST00000561881 1810 ntBASIC4.1□□□□□ -1.75
PRKNO60260 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PRKNO60260 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PRKNO60260 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.1□□□□□ -1.75
PRKNO60260 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.1□□□□□ -1.75
PRKNO60260 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.1□□□□□ -1.75
PRKNO60260 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.1□□□□□ -1.75
PRKNO60260 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.1□□□□□ -1.75
PRKNO60260 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.1□□□□□ -1.75
PRKNO60260 RPS29P17-201ENST00000430795 166 ntBASIC4.1□□□□□ -1.75
PRKNO60260 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.1□□□□□ -1.75
PRKNO60260 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.1□□□□□ -1.75
PRKNO60260 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.1□□□□□ -1.75
PRKNO60260 NECAP1P2-201ENST00000455668 727 ntBASIC4.1□□□□□ -1.75
PRKNO60260 AL445433.1-201ENST00000457507 257 ntBASIC4.1□□□□□ -1.75
PRKNO60260 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.1□□□□□ -1.75
PRKNO60260 AC010486.2-201ENST00000505572 483 ntBASIC4.1□□□□□ -1.75
PRKNO60260 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PRKNO60260 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms