Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.53□□□□□ -1.68
LDB2O43679 MIR7973-1-201ENST00000614683 76 ntBASIC4.53□□□□□ -1.68
LDB2O43679 MIR6810-201ENST00000622701 70 ntBASIC4.53□□□□□ -1.68
LDB2O43679 AC091905.2-201ENST00000623143 306 ntBASIC4.53□□□□□ -1.68
LDB2O43679 AC067852.7-201ENST00000623270 535 ntBASIC4.53□□□□□ -1.68
LDB2O43679 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.53□□□□□ -1.68
LDB2O43679 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.53□□□□□ -1.68
LDB2O43679 OR8B1P-202ENST00000641132 1178 ntBASIC4.53□□□□□ -1.68
LDB2O43679 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LDB2O43679 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LDB2O43679 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LDB2O43679 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
LDB2O43679 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LDB2O43679 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LDB2O43679 MAPK10-303ENST00000641324 3959 ntBASIC4.53□□□□□ -1.68
LDB2O43679 BTBD10P1-201ENST00000549824 1352 ntBASIC4.53□□□□□ -1.69
LDB2O43679 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.52□□□□□ -1.69
LDB2O43679 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LDB2O43679 AC139769.1-204ENST00000472297 1931 ntBASIC4.52□□□□□ -1.69
LDB2O43679 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LDB2O43679 OR51H2P-202ENST00000641424 3046 ntBASIC4.52□□□□□ -1.69
LDB2O43679 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
LDB2O43679 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.52□□□□□ -1.69
LDB2O43679 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.52□□□□□ -1.69
LDB2O43679 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LDB2O43679 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LDB2O43679 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LDB2O43679 RNU4-44P-201ENST00000363050 141 ntBASIC4.52□□□□□ -1.69
LDB2O43679 RNU1-20P-201ENST00000363314 162 ntBASIC4.52□□□□□ -1.69
LDB2O43679 RNU1-63P-201ENST00000383902 164 ntBASIC4.52□□□□□ -1.69
LDB2O43679 RNA5SP332-201ENST00000391063 115 ntBASIC4.52□□□□□ -1.69
LDB2O43679 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.52□□□□□ -1.69
LDB2O43679 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.52□□□□□ -1.69
LDB2O43679 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.52□□□□□ -1.69
LDB2O43679 GTF2IP7-202ENST00000436677 309 ntBASIC4.52□□□□□ -1.69
LDB2O43679 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.52□□□□□ -1.69
LDB2O43679 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.52□□□□□ -1.69
LDB2O43679 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.52□□□□□ -1.69
LDB2O43679 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LDB2O43679 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.52□□□□□ -1.69
LDB2O43679 snoU13.1-201ENST00000459157 104 ntBASIC4.52□□□□□ -1.69
LDB2O43679 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.52□□□□□ -1.69
LDB2O43679 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.52□□□□□ -1.69
LDB2O43679 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LDB2O43679 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.52□□□□□ -1.69
LDB2O43679 RN7SKP92-201ENST00000517266 244 ntBASIC4.52□□□□□ -1.69
LDB2O43679 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.52□□□□□ -1.69
LDB2O43679 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.52□□□□□ -1.69
LDB2O43679 RPL21P7-201ENST00000557463 483 ntBASIC4.52□□□□□ -1.69
LDB2O43679 MIR3912-201ENST00000577566 105 ntBASIC4.52□□□□□ -1.69
LDB2O43679 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.52□□□□□ -1.69
LDB2O43679 AC010620.1-201ENST00000601088 1102 ntBASIC4.52□□□□□ -1.69
LDB2O43679 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.52□□□□□ -1.69
LDB2O43679 AC015726.1-201ENST00000602353 681 ntBASIC4.52□□□□□ -1.69
LDB2O43679 AC103792.1-201ENST00000603591 919 ntBASIC4.52□□□□□ -1.69
LDB2O43679 AC010201.1-201ENST00000605051 540 ntBASIC4.52□□□□□ -1.69
LDB2O43679 AC096553.1-201ENST00000605169 829 ntBASIC4.52□□□□□ -1.69
LDB2O43679 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.52□□□□□ -1.69
LDB2O43679 AC105227.2-201ENST00000615075 605 ntBASIC4.52□□□□□ -1.69
LDB2O43679 AC009090.3-201ENST00000616553 565 ntBASIC4.52□□□□□ -1.69
LDB2O43679 AL603755.1-201ENST00000619504 163 ntBASIC4.52□□□□□ -1.69
LDB2O43679 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LDB2O43679 OR2L1P-202ENST00000641567 1023 ntBASIC4.52□□□□□ -1.69
LDB2O43679 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LDB2O43679 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
LDB2O43679 NXPH1-205ENST00000602349 1953 ntBASIC4.52□□□□□ -1.69
LDB2O43679 AP005901.5-201ENST00000545779 1796 ntBASIC4.52□□□□□ -1.69
LDB2O43679 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LDB2O43679 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LDB2O43679 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.52□□□□□ -1.69
LDB2O43679 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.52□□□□□ -1.69
LDB2O43679 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LDB2O43679 Z98755.1-201ENST00000407015 1384 ntBASIC4.52□□□□□ -1.69
LDB2O43679 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LDB2O43679 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LDB2O43679 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.51□□□□□ -1.69
LDB2O43679 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LDB2O43679 MFSD8-216ENST00000641147 4009 ntBASIC4.51□□□□□ -1.69
LDB2O43679 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
LDB2O43679 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LDB2O43679 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LDB2O43679 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.51□□□□□ -1.69
LDB2O43679 RNU6-707P-201ENST00000364647 95 ntBASIC4.51□□□□□ -1.69
LDB2O43679 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
LDB2O43679 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
LDB2O43679 MIR1303-201ENST00000408625 86 ntBASIC4.51□□□□□ -1.69
LDB2O43679 RNU4-72P-201ENST00000410754 173 ntBASIC4.51□□□□□ -1.69
LDB2O43679 TRGV6-201ENST00000417928 299 ntBASIC4.51□□□□□ -1.69
LDB2O43679 C4BPAP2-201ENST00000428434 478 ntBASIC4.51□□□□□ -1.69
LDB2O43679 MTCO1P3-201ENST00000429327 192 ntBASIC4.51□□□□□ -1.69
LDB2O43679 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.51□□□□□ -1.69
LDB2O43679 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.51□□□□□ -1.69
LDB2O43679 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LDB2O43679 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.51□□□□□ -1.69
LDB2O43679 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.51□□□□□ -1.69
LDB2O43679 ARL2BPP10-201ENST00000446487 531 ntBASIC4.51□□□□□ -1.69
LDB2O43679 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.51□□□□□ -1.69
LDB2O43679 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LDB2O43679 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.51□□□□□ -1.69
LDB2O43679 AC012671.1-201ENST00000451912 203 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms