Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC005002.1-201ENST00000447458 540 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC28A1O00337 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC28A1O00337 RPL36AP13-201ENST00000457490 317 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SLC28A1O00337 RPL35AP28-201ENST00000459730 331 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 RPS20P21-201ENST00000466859 343 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 AC092902.1-201ENST00000486999 259 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 RPL35P6-201ENST00000490024 372 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AC016550.1-201ENST00000505348 785 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 AC111000.3-201ENST00000508057 576 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 KCTD9P2-201ENST00000512203 1013 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 HMGN1P15-201ENST00000513870 295 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 IGKV2-38-201ENST00000517443 247 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 AC010476.1-201ENST00000519111 851 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 IGLVIV-53-201ENST00000520107 367 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC28A1O00337 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC28A1O00337 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC28A1O00337 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AC113194.1-201ENST00000606037 500 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AC100827.5-201ENST00000615883 426 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 AC099669.2-201ENST00000616549 437 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AC103858.2-201ENST00000621471 543 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 MIR4727-201ENST00000622232 55 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AL109659.3-201ENST00000624985 950 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC28A1O00337 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SLC28A1O00337 AL158163.1-201ENST00000603915 1649 ntBASIC4.02□□□□□ -1.77
SLC28A1O00337 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC28A1O00337 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC28A1O00337 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SLC28A1O00337 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC28A1O00337 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC28A1O00337 DCAF13P3-201ENST00000561147 1334 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 AC016588.2-201ENST00000632484 3021 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SLC28A1O00337 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC28A1O00337 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC28A1O00337 RNVU1-6-201ENST00000364688 164 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 HMGB3P19-201ENST00000403971 560 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 RNU6-272P-201ENST00000411028 104 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC28A1O00337 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC28A1O00337 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC28A1O00337 NUP35P2-201ENST00000416748 943 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 AC092647.1-201ENST00000420654 287 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 RWDD4P2-201ENST00000426392 563 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC28A1O00337 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC28A1O00337 AC002542.1-201ENST00000440683 193 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC28A1O00337 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC28A1O00337 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC28A1O00337 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC28A1O00337 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC28A1O00337 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC28A1O00337 RWDD4P1-201ENST00000488019 565 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC28A1O00337 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC28A1O00337 PRELID3BP4-201ENST00000515476 571 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 RNA5SP49-201ENST00000516450 115 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 RNA5SP519-201ENST00000516480 119 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC28A1O00337 AC124293.1-201ENST00000530034 493 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
SLC28A1O00337 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.01□□□□□ -1.77
SLC28A1O00337 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.01□□□□□ -1.77
SLC28A1O00337 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC28A1O00337 MIR4789-201ENST00000577469 82 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 AP001180.3-201ENST00000582221 145 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 AC104662.1-201ENST00000604448 511 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.01□□□□□ -1.77
SLC28A1O00337 AC010680.4-201ENST00000605334 543 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 AP003117.2-201ENST00000606010 545 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 AC004948.1-201ENST00000609858 672 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 AL359535.1-201ENST00000612100 1087 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC28A1O00337 AC009452.1-201ENST00000640823 606 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.01□□□□□ -1.77
SLC28A1O00337 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC28A1O00337 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SLC28A1O00337 AL356489.2-201ENST00000566968 3528 ntBASIC4.01□□□□□ -1.77
SLC28A1O00337 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC28A1O00337 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
SLC28A1O00337 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC28A1O00337 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SLC28A1O00337 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC28A1O00337 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4□□□□□ -1.77
SLC28A1O00337 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms