Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 USP12PY-201ENST00000427677 1064 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 AF228730.2-201ENST00000438784 848 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 HMGB1P16-201ENST00000447155 540 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 SEPT14P24-201ENST00000447236 180 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC188H7C350 CEACAMP6-201ENST00000452007 574 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC188H7C350 AC104689.1-201ENST00000473356 768 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 RPS29P19-201ENST00000479709 171 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 AC069499.1-201ENST00000489433 509 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CCDC188H7C350 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC188H7C350 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC188H7C350 AL592156.1-201ENST00000508758 304 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC188H7C350 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC188H7C350 OR5AN2P-201ENST00000534535 896 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC188H7C350 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC188H7C350 MIR3934-201ENST00000579806 107 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC188H7C350 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC188H7C350 VN1R74P-201ENST00000613259 503 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 AP000843.1-201ENST00000624880 701 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 AL773545.4-201ENST00000637262 310 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 AL513478.4-201ENST00000641636 310 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 AC139713.2-210ENST00000641741 992 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC188H7C350 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC188H7C350 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCDC188H7C350 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC188H7C350 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC188H7C350 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC188H7C350 AC131971.1-201ENST00000332881 1482 ntBASIC4.36□□□□□ -1.71
CCDC188H7C350 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CCDC188H7C350 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC188H7C350 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC188H7C350 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC188H7C350 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC188H7C350 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC188H7C350 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC188H7C350 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CCDC188H7C350 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC188H7C350 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC188H7C350 RNA5SP87-201ENST00000384155 118 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCDC188H7C350 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC188H7C350 RPL7P27-201ENST00000403775 720 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 RN7SKP56-201ENST00000410513 331 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 PGBD4P8-201ENST00000412993 562 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 TMSB10P2-201ENST00000416049 131 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 NUP35P2-201ENST00000416748 943 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AL391219.1-201ENST00000422570 483 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AL157831.1-201ENST00000426134 473 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC188H7C350 AC087650.1-201ENST00000431445 468 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC188H7C350 AC000041.1-201ENST00000439655 175 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AC073648.4-201ENST00000442655 781 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AC044797.1-201ENST00000445744 679 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC188H7C350 HIGD1AP8-201ENST00000453927 274 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AL133477.1-201ENST00000457472 514 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 RPL36AP13-201ENST00000457490 317 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 RPS3AP41-201ENST00000462701 778 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC188H7C350 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC188H7C350 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC188H7C350 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC188H7C350 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC188H7C350 AC006518.2-201ENST00000542513 940 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC188H7C350 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC188H7C350 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC188H7C350 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC188H7C350 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC188H7C350 AP001542.2-201ENST00000593141 364 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC188H7C350 VN1R87P-201ENST00000596706 487 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AC113403.1-201ENST00000604910 193 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AC013468.1-201ENST00000608680 598 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AL512427.1-201ENST00000618593 349 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCDC188H7C350 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 AC140479.6-201ENST00000633535 357 ntBASIC4.35□□□□□ -1.71
CCDC188H7C350 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC188H7C350 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC188H7C350 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC188H7C350 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC188H7C350 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CCDC188H7C350 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
CCDC188H7C350 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC188H7C350 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC188H7C350 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC188H7C350 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC188H7C350 LINC02471-203ENST00000641941 4752 ntBASIC4.34□□□□□ -1.71
CCDC188H7C350 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CCDC188H7C350 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC188H7C350 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC188H7C350 RNA5SP322-201ENST00000363617 119 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms