Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 RPL23AP65-201ENST00000475608 468 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 MTND4LP2-201ENST00000502312 285 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 NDUFA5P12-201ENST00000503796 343 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC018797.3-201ENST00000513388 1241 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SRRM4A7MD48 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC091042.1-201ENST00000579213 173 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 BNIP3P32-201ENST00000600015 554 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 LLPHP1-201ENST00000603571 367 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC233280.2-201ENST00000603917 1070 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC069545.1-201ENST00000605671 358 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 AP002360.3-201ENST00000607673 710 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC091046.2-201ENST00000620775 665 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC091905.2-201ENST00000623143 306 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC068787.1-201ENST00000623908 691 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 MFSD8-220ENST00000641243 1422 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SRRM4A7MD48 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SRRM4A7MD48 AC108467.2-201ENST00000617640 1597 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
SRRM4A7MD48 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SRRM4A7MD48 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SRRM4A7MD48 AL356489.2-201ENST00000566968 3528 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.66□□□□□ -1.82
SRRM4A7MD48 ZNF137P-201ENST00000456718 1920 ntBASIC3.66□□□□□ -1.82
SRRM4A7MD48 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SRRM4A7MD48 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.65□□□□□ -1.82
SRRM4A7MD48 AC087190.4-201ENST00000574616 8334 ntBASIC3.65□□□□□ -1.82
SRRM4A7MD48 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.65□□□□□ -1.82
SRRM4A7MD48 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SRRM4A7MD48 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SRRM4A7MD48 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SRRM4A7MD48 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 RNU6-441P-201ENST00000384545 106 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 SNORD116-23-201ENST00000384645 92 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 AL133264.1-201ENST00000407157 562 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC004987.3-201ENST00000413879 771 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 RAD23BP1-201ENST00000421404 1227 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 PDSS1P1-201ENST00000422953 1114 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 AL590762.4-201ENST00000425885 253 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 RWDD4P2-201ENST00000426392 563 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 RPP40P1-201ENST00000426762 456 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 Z93242.1-201ENST00000427102 353 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 YWHAZP8-201ENST00000436935 731 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC073587.1-201ENST00000447093 876 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 EIF2S2P2-201ENST00000447161 982 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 EXOSC3P1-201ENST00000448649 500 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 RPL29P29-201ENST00000448725 423 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC112492.1-201ENST00000449607 712 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SRRM4A7MD48 BX276092.4-201ENST00000452056 248 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SRRM4A7MD48 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 RPL7AP28-201ENST00000464513 571 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 RPL23AP44-201ENST00000482216 473 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC011005.3-201ENST00000491624 395 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC108022.1-201ENST00000493466 478 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 GTF2IP9-201ENST00000502460 301 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC109471.1-201ENST00000511631 612 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 OR10V3P-201ENST00000525712 725 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC092747.2-201ENST00000545069 983 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 PCNPP1-201ENST00000552501 511 ntBASIC3.65□□□□□ -1.83
SRRM4A7MD48 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.65□□□□□ -1.83
SRRM4A7MD48 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms