Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC011005.3-201ENST00000491624 395 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 TRAV31-201ENST00000502780 342 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 IGBP1P5-201ENST00000507524 1000 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC008885.2-201ENST00000509506 930 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 RN7SKP96-201ENST00000516948 297 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AL442163.2-201ENST00000553912 710 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC069061.3-201ENST00000582254 823 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AP001160.4-201ENST00000596971 382 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 LLPHP1-201ENST00000603571 367 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AL592436.1-201ENST00000605135 558 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 RMST_10.1-201ENST00000616309 154 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AL445493.3-201ENST00000619568 477 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC092608.3-201ENST00000625017 386 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 AC017104.5-201ENST00000637647 639 ntBASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
KCNIP3Q9Y2W7 NMD3P1-201ENST00000439704 1488 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 DCAF13P1-201ENST00000495256 1330 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 NSRP1P1-201ENST00000444067 1693 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 RNU6-1339P-201ENST00000363574 91 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 RNU6-171P-201ENST00000384354 107 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 SNORA51.12-201ENST00000384448 134 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 MIR153-1-201ENST00000384914 90 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 MTCO3P31-201ENST00000405526 789 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 ATF1P1-201ENST00000406040 927 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 SNORA11F-201ENST00000408237 128 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 RPL21P47-201ENST00000483696 477 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 RN7SL271P-201ENST00000487601 295 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 MTND3P24-201ENST00000506306 329 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 MTND2P31-201ENST00000512602 616 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AC010342.1-201ENST00000514047 877 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 MTND2P26-201ENST00000528255 1029 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 PDCL2P2-201ENST00000533651 189 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 RBM7-208ENST00000545678 867 ntTSL 3 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 GNRHR2P1-201ENST00000555315 631 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 ATP5F1P7-201ENST00000567330 760 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AC079171.1-201ENST00000568788 914 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AC091042.1-201ENST00000579213 173 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 MIR3176-201ENST00000582210 90 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AC005084.1-201ENST00000605160 304 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AC007546.1-201ENST00000619452 559 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AC006213.5-201ENST00000619673 288 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AC097460.3-201ENST00000623099 442 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 NOL8P1-201ENST00000508336 3529 ntBASIC3.47□□□□□ -1.85
KCNIP3Q9Y2W7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
KCNIP3Q9Y2W7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms