Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.07□□□□□ -1.76
LHX3Q9UBR4 MTND4LP25-201ENST00000570218 163 ntBASIC4.07□□□□□ -1.76
LHX3Q9UBR4 AC012254.4-201ENST00000588843 273 ntBASIC4.07□□□□□ -1.76
LHX3Q9UBR4 AC125494.3-201ENST00000602759 455 ntBASIC4.07□□□□□ -1.76
LHX3Q9UBR4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.07□□□□□ -1.76
LHX3Q9UBR4 STMN1P1-201ENST00000617809 440 ntBASIC4.07□□□□□ -1.76
LHX3Q9UBR4 CDRT1-208ENST00000630868 794 ntBASIC4.07□□□□□ -1.76
LHX3Q9UBR4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LHX3Q9UBR4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.07□□□□□ -1.76
LHX3Q9UBR4 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.07□□□□□ -1.76
LHX3Q9UBR4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX3Q9UBR4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.07□□□□□ -1.76
LHX3Q9UBR4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
LHX3Q9UBR4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.07□□□□□ -1.76
LHX3Q9UBR4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX3Q9UBR4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX3Q9UBR4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX3Q9UBR4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
LHX3Q9UBR4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 MFSD8-213ENST00000641134 1327 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AL049555.1-201ENST00000562834 1933 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 RNA5SP399-201ENST00000364003 117 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 MTATP6P31-201ENST00000406985 692 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 MIR1193-201ENST00000408109 78 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 RN7SKP263-201ENST00000411194 309 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AC073310.1-201ENST00000423226 1033 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 MTND2P11-201ENST00000423638 648 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AL138785.1-201ENST00000425821 331 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AL031736.2-201ENST00000426573 787 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 MTCO1P54-201ENST00000430139 712 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 MTCO1P43-201ENST00000431831 488 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AL357520.1-201ENST00000441557 453 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 HMGB3P9-201ENST00000441799 583 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 FABP3P2-201ENST00000453169 399 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AL035407.2-201ENST00000454090 378 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 RNU6-467P-201ENST00000517027 110 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AC084824.1-201ENST00000550917 1005 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 OR4U1P-201ENST00000554958 912 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AC093510.2-201ENST00000562820 896 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AC133552.5-201ENST00000604266 540 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 MIR8084-201ENST00000614105 89 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AC006213.5-201ENST00000619673 288 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 MIR6500-201ENST00000622700 86 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AC024595.1-201ENST00000623088 387 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 CFTRP2-201ENST00000634304 199 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AL773545.4-201ENST00000637262 310 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 AL513478.4-201ENST00000641636 310 ntBASIC4.06□□□□□ -1.76
LHX3Q9UBR4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
LHX3Q9UBR4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
LHX3Q9UBR4 AC100871.1-201ENST00000507871 1456 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LHX3Q9UBR4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LHX3Q9UBR4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.05□□□□□ -1.76
LHX3Q9UBR4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LHX3Q9UBR4 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LHX3Q9UBR4 RNU6-543P-201ENST00000362576 108 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 OR52E6-202ENST00000379946 954 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 RNU2-6P-201ENST00000411404 190 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 AC008173.1-201ENST00000418901 264 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.05□□□□□ -1.76
LHX3Q9UBR4 RPS7P5-201ENST00000441482 581 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 YWHAQP9-201ENST00000445891 512 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 AC068135.1-201ENST00000446164 246 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 AC073587.1-201ENST00000447093 876 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.05□□□□□ -1.76
LHX3Q9UBR4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.05□□□□□ -1.76
LHX3Q9UBR4 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.05□□□□□ -1.76
LHX3Q9UBR4 CYCSP20-201ENST00000473154 315 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 RPS4XP15-201ENST00000489210 795 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 AC110792.1-201ENST00000491826 472 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.05□□□□□ -1.76
LHX3Q9UBR4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.05□□□□□ -1.76
LHX3Q9UBR4 AC112518.2-201ENST00000508565 425 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 AF186190.1-201ENST00000517470 480 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 AC008562.1-201ENST00000521763 330 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 OR4A2P-201ENST00000527276 913 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 YPEL5P3-201ENST00000547227 352 ntBASIC4.05□□□□□ -1.76
LHX3Q9UBR4 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms