Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 SNORD116-9-201ENST00000384000 95 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 SNORD116-3-201ENST00000384287 95 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 SNORD116-7-201ENST00000384404 95 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 SNORD116-5-201ENST00000384462 95 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 MIR16-1-201ENST00000385271 89 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 RNA5SP113-201ENST00000410486 84 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 LUZP4P1-201ENST00000415420 344 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 ZNF885P-201ENST00000420174 1098 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC004074.1-201ENST00000421810 1063 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 RPS24P8-201ENST00000431490 402 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 THAP5P1-201ENST00000439089 262 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 RPS26P2-201ENST00000440331 348 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 MTND2P4-201ENST00000445034 1004 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AL606662.1-201ENST00000445763 553 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC073264.2-201ENST00000448886 166 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC002553.2-201ENST00000453217 340 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 RPL21P134-201ENST00000453468 483 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC063943.1-201ENST00000465434 453 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC021146.8-201ENST00000507455 733 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 MTND1P22-201ENST00000510572 951 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 RN7SL802P-201ENST00000577858 299 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 MIR5699-201ENST00000578903 90 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 RN7SL176P-201ENST00000580352 264 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC106791.2-201ENST00000604680 391 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC069545.1-201ENST00000605671 358 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC072039.2-201ENST00000608883 439 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AL139418.1-201ENST00000613613 177 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 uc_338.9-201ENST00000617424 182 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 MIR6810-201ENST00000622701 70 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AL445487.1-201ENST00000415694 1580 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AC025263.3-201ENST00000622965 1396 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 AL672167.1-205ENST00000641112 3080 ntBASIC4.91□□□□□ -1.62
USP29Q9HBJ7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
USP29Q9HBJ7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
USP29Q9HBJ7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
USP29Q9HBJ7 RNU6-619P-201ENST00000365146 108 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 RNU6-398P-201ENST00000384143 109 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 U3.30-201ENST00000391308 210 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 RNU6-757P-201ENST00000410334 100 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC092809.1-201ENST00000441469 474 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC118469.1-201ENST00000442943 488 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 SLC25A18P1-201ENST00000449385 454 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 RPS27AP8-201ENST00000452665 445 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AL161747.1-201ENST00000480068 358 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC108734.3-201ENST00000481241 1165 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC011005.3-201ENST00000491624 395 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC116353.3-201ENST00000511215 249 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 ELOCP32-201ENST00000548625 324 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC079075.1-201ENST00000559543 878 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC022726.1-201ENST00000587475 207 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC233280.2-201ENST00000603917 1070 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AL031281.1-201ENST00000604049 488 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC124312.4-201ENST00000605533 310 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AL121890.2-201ENST00000617644 465 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AP000346.3-201ENST00000622821 210 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AF001550.2-201ENST00000636643 217 ntBASIC4.9□□□□□ -1.63
USP29Q9HBJ7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.9□□□□□ -1.63
USP29Q9HBJ7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms