Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 ENSAP3-201ENST00000312710 333 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AP002784.2-201ENST00000397300 549 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AL391417.1-201ENST00000404100 426 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 RN7SKP229-201ENST00000410465 302 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 RPS6P12-201ENST00000432491 726 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 HMGB1P37-201ENST00000439613 609 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 RPS26P30-201ENST00000443431 335 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AL162591.2-201ENST00000449634 317 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 snoU13.20-201ENST00000459180 104 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 RPL21P18-201ENST00000469899 480 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC074386.1-201ENST00000476560 767 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 RPSAP50-201ENST00000481955 852 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 RN7SL727P-201ENST00000482164 296 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 RN7SL629P-201ENST00000489622 285 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AL035404.1-201ENST00000497982 568 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC026784.1-201ENST00000507986 352 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 USP9YP5-201ENST00000511770 630 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC083923.1-201ENST00000523708 376 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC063949.1-201ENST00000552900 865 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 MTND4LP24-201ENST00000572277 291 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 DNAJC19P3-201ENST00000594491 331 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC125494.3-201ENST00000602759 455 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 OR2BH1P-201ENST00000608850 864 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 RMST_8.1-201ENST00000610287 165 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC024595.1-201ENST00000623088 387 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AC067852.7-201ENST00000623270 535 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 CR392039.4-201ENST00000624968 501 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 AL132640.2-201ENST00000559968 1698 ntBASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.13□□□□□ -1.75
VIPAS39Q9H9C1 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 HSPA8P19-201ENST00000505359 1517 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC006504.1-201ENST00000562493 3666 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 RNU6-1176P-201ENST00000390955 107 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC234782.4-201ENST00000417646 1048 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 OR5AW1P-201ENST00000426334 1006 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 RWDD4P2-201ENST00000426392 563 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC068135.1-201ENST00000446164 246 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC098824.1-201ENST00000453565 980 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC011005.3-201ENST00000491624 395 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 RPL29P14-201ENST00000495837 428 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 KRT19P6-201ENST00000510983 209 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC010285.3-201ENST00000511668 676 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 DEFB109D-201ENST00000529497 240 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 HMGN2P6-201ENST00000551091 273 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 EDDM3DP-201ENST00000554692 434 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC027104.1-201ENST00000563702 681 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC090751.1-201ENST00000566966 267 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 MIR4789-201ENST00000577469 82 ntBASIC4.12□□□□□ -1.75
VIPAS39Q9H9C1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms