Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC068020.1-201ENST00000594215 661 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC130352.1-201ENST00000602979 661 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 MTND3P19-201ENST00000603825 345 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AL035411.2-201ENST00000604022 421 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC024060.1-201ENST00000607052 494 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC007349.4-201ENST00000608114 532 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AL121890.3-201ENST00000618494 516 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AL603755.1-201ENST00000619504 163 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AL158062.1-201ENST00000619632 745 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC068831.8-201ENST00000620171 435 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AP005019.3-201ENST00000620418 560 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AL022322.2-201ENST00000624072 20397 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 CASC19-206ENST00000641028 1430 ntBASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
EBF3Q9H4W6 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 OR51H2P-202ENST00000641424 3046 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC021146.4-201ENST00000309229 279 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 Y_RNA.194-201ENST00000363985 102 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 RNA5SP509-201ENST00000364577 119 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 RNA5SP479-201ENST00000364858 117 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 Z98745.1-201ENST00000402553 494 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 RPS3AP37-201ENST00000419176 745 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 RPL7AP25-201ENST00000423357 805 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC005189.1-201ENST00000431286 310 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 GTF2IP3-201ENST00000433887 494 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 YWHAZP2-201ENST00000440317 728 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 VN1R32P-201ENST00000452234 905 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 ANKRD26P4-201ENST00000455755 950 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC005008.1-201ENST00000456151 612 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 MTCO2P18-201ENST00000457151 658 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC010618.1-201ENST00000469924 477 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 RPL21P126-201ENST00000470049 478 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC109327.1-201ENST00000471666 403 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 MTND2P14-201ENST00000482139 351 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 NIP7P2-201ENST00000485801 544 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC109927.2-201ENST00000506416 303 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC034244.1-201ENST00000507687 207 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC108120.2-201ENST00000512973 294 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 IGLVIV-65-201ENST00000517313 360 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 MTCYBP19-201ENST00000517463 1124 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 HMGB1P1-201ENST00000522557 636 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC022880.1-201ENST00000534017 973 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 RFPL1S-203ENST00000539579 330 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC008015.1-201ENST00000555505 465 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AL021997.1-201ENST00000605757 193 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 VIS1.1-201ENST00000610517 203 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AC006840.1-201ENST00000623069 542 ntBASIC4.79□□□□□ -1.64
EBF3Q9H4W6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.79□□□□□ -1.64
EBF3Q9H4W6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 DDX18P5-201ENST00000534547 1306 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EBF3Q9H4W6 AC107021.2-201ENST00000567714 2095 ntBASIC4.78□□□□□ -1.64
EBF3Q9H4W6 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms