Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC023813.2-201ENST00000564321 469 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC004987.4-201ENST00000603383 338 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AL354984.3-201ENST00000604803 325 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AL445423.1-201ENST00000609941 536 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC023509.5-201ENST00000617434 807 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 MIR7154-201ENST00000620673 73 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC079248.2-201ENST00000623779 326 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 LINC01808-202ENST00000641680 1116 ntBASIC5.39□□□□□ -1.55
SALL3Q9BXA9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SALL3Q9BXA9 AL137100.1-201ENST00000556703 1620 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 RLIMP2-201ENST00000427891 1563 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 MAPK10-286ENST00000641208 8747 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 Y_RNA.578-201ENST00000390903 88 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 LINC01881-201ENST00000416103 412 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC234781.2-201ENST00000426370 994 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 MTND5P2-201ENST00000442927 1142 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 MTND1P1-201ENST00000445453 368 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 CASP3P1-201ENST00000446037 609 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 GTF2IP12-201ENST00000456547 356 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 RPL7P32-201ENST00000457119 744 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 RPS4XP12-201ENST00000461747 709 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC007537.2-201ENST00000472093 511 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC093755.1-201ENST00000512950 1023 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 MTND5P13-201ENST00000513046 1079 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC122134.1-201ENST00000565664 1104 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AL592494.3-201ENST00000609485 464 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AP000255.1-201ENST00000610276 676 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 AC015922.4-201ENST00000612568 690 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 Z69908.1-201ENST00000622603 247 ntBASIC5.38□□□□□ -1.55
SALL3Q9BXA9 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SALL3Q9BXA9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 VN1R8P-201ENST00000407739 893 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC092638.1-201ENST00000411966 1275 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC009237.10-201ENST00000414112 510 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 MTCO3P41-201ENST00000414801 328 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 PTP4A1P5-201ENST00000420305 455 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 GNG5P5-201ENST00000420444 220 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AL356387.2-201ENST00000422272 243 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC245028.1-201ENST00000423259 256 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 OR5BE1P-201ENST00000425977 939 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 C8orf59P1-201ENST00000429930 303 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 DLGAP5P1-201ENST00000430307 464 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 HMGB3P10-201ENST00000434734 572 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC092393.1-201ENST00000439625 742 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AL031667.1-201ENST00000440222 725 ntBASIC5.37□□□□□ -1.55
SALL3Q9BXA9 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.37□□□□□ -1.55
SALL3Q9BXA9 ABCF2P2-201ENST00000450549 296 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms