Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 MIR4277-201ENST00000578298 84 ntBASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 AC010680.3-201ENST00000604215 520 ntBASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 RNU4-89P-201ENST00000607443 133 ntBASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 AC116563.2-201ENST00000624751 535 ntBASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 AC073073.2-201ENST00000609827 2578 ntBASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 AC007529.1-201ENST00000418574 2178 ntBASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.14□□□□□ -1.75
BPIFA3Q9BQP9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 RNF6P1-201ENST00000444889 1784 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AL356095.1-201ENST00000417217 199 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 HMGB1P32-201ENST00000425971 565 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AC068287.1-201ENST00000430283 295 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AC074367.1-201ENST00000438685 1125 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 MRPS31P2-201ENST00000451581 518 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 RPS29P33-201ENST00000456717 146 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AC007686.1-201ENST00000488511 463 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AC110792.1-201ENST00000491826 472 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 IGKV2D-10-201ENST00000520194 281 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AC135001.1-201ENST00000544546 283 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AL109741.3-201ENST00000561748 592 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AC011477.5-201ENST00000586571 259 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 MIR7973-1-201ENST00000614683 76 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 AC009452.1-201ENST00000640823 606 ntBASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
BPIFA3Q9BQP9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 USP8P1-201ENST00000494673 3183 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 RNU6-31P-201ENST00000384388 108 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 OR6C69P-201ENST00000394268 893 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AL136116.1-201ENST00000403591 381 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 ZNF602P-201ENST00000405929 924 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 RN7SKP285-201ENST00000410137 318 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 MTND4P11-201ENST00000417020 1058 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 TPMTP4-201ENST00000450749 678 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AL645939.1-201ENST00000453429 797 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 RPL7P48-201ENST00000461513 746 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 FCF1P3-201ENST00000496394 590 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 USP9YP5-201ENST00000511770 630 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 RNU6-491P-201ENST00000516099 110 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AL121766.1-201ENST00000547436 487 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AGGF1P8-201ENST00000562979 1000 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AC069366.1-201ENST00000583159 838 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AC068790.4-201ENST00000602474 263 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AL391261.4-201ENST00000616012 481 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 AC090506.2-201ENST00000624521 419 ntBASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.12□□□□□ -1.75
BPIFA3Q9BQP9 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BPIFA3Q9BQP9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BPIFA3Q9BQP9 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
BPIFA3Q9BQP9 RLIMP1-201ENST00000339626 1680 ntBASIC4.11□□□□□ -1.75
BPIFA3Q9BQP9 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms