Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 LAMTOR5P1-201ENST00000444290 270 ntBASIC7.06□□□□□ -1.28
PHOX2BQ99453 RPS26P39-201ENST00000469206 341 ntBASIC7.06□□□□□ -1.28
PHOX2BQ99453 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PHOX2BQ99453 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC7.06□□□□□ -1.28
PHOX2BQ99453 FTH1P9-201ENST00000513251 355 ntBASIC7.06□□□□□ -1.28
PHOX2BQ99453 AC087854.1-201ENST00000519706 414 ntBASIC7.06□□□□□ -1.28
PHOX2BQ99453 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC7.06□□□□□ -1.28
PHOX2BQ99453 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC7.06□□□□□ -1.28
PHOX2BQ99453 EEF1B2P1-201ENST00000567221 672 ntBASIC7.06□□□□□ -1.28
PHOX2BQ99453 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.06□□□□□ -1.28
PHOX2BQ99453 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC7.06□□□□□ -1.28
PHOX2BQ99453 AL450226.2-201ENST00000622913 439 ntBASIC7.06□□□□□ -1.28
PHOX2BQ99453 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.06□□□□□ -1.28
PHOX2BQ99453 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC7.06□□□□□ -1.28
PHOX2BQ99453 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PHOX2BQ99453 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PHOX2BQ99453 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
PHOX2BQ99453 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.06□□□□□ -1.28
PHOX2BQ99453 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC7.06□□□□□ -1.28
PHOX2BQ99453 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PHOX2BQ99453 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PHOX2BQ99453 MAPK10-272ENST00000641110 2724 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
PHOX2BQ99453 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC7.06□□□□□ -1.28
PHOX2BQ99453 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
PHOX2BQ99453 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
PHOX2BQ99453 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 AC104966.1-201ENST00000467010 1464 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 AC110716.2-201ENST00000563865 3945 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 RNA5SP472-201ENST00000363868 119 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 RNU6-960P-201ENST00000364056 120 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 SNORA58B-201ENST00000364259 136 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 MRPS6P2-201ENST00000381143 370 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 E2F6P2-201ENST00000420708 748 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 AC022431.1-201ENST00000450941 438 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 RPS24P6-201ENST00000452670 400 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 GSTA11P-201ENST00000452866 669 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 AC116533.1-201ENST00000459748 321 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 RN7SL860P-201ENST00000473738 223 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 AC060775.1-201ENST00000518241 520 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 AC022882.1-201ENST00000532142 501 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 AC040162.2-201ENST00000573092 157 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 AC104695.3-201ENST00000604052 296 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 AL355297.3-201ENST00000604082 446 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 MIR6730-201ENST00000622213 67 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 AL122023.1-201ENST00000622847 530 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 ALG13-230ENST00000623189 458 ntTSL 3 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
PHOX2BQ99453 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
PHOX2BQ99453 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.05□□□□□ -1.28
PHOX2BQ99453 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PHOX2BQ99453 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
PHOX2BQ99453 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
PHOX2BQ99453 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.04□□□□□ -1.28
PHOX2BQ99453 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
PHOX2BQ99453 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
PHOX2BQ99453 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
PHOX2BQ99453 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms