Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD1Q96PZ7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD1Q96PZ7 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CSMD1Q96PZ7 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD1Q96PZ7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD1Q96PZ7 HMGN1P24-201ENST00000412282 298 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 AC140076.1-201ENST00000449897 361 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 AC073657.2-201ENST00000605661 303 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 AL138885.1-201ENST00000405921 675 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 RN7SKP53-201ENST00000411337 315 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 TXNP1-201ENST00000441872 371 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 MIR7702-201ENST00000621931 59 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 AC127502.3-201ENST00000636170 1206 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 RPL31P50-201ENST00000471002 296 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 UBA52P3-201ENST00000491303 382 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 RNU6-513P-201ENST00000516104 104 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 AL773545.4-201ENST00000637262 310 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 AL513478.4-201ENST00000641636 310 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 RIOK3P1-201ENST00000418778 1528 ntBASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.92□□□□□ -1.94
CSMD1Q96PZ7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 AC007496.3-201ENST00000624987 3443 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 RPL6P21-201ENST00000418672 846 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 HMGN2P7-201ENST00000456186 273 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 RNA5SP103-201ENST00000459503 118 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 S100A11P1-201ENST00000477525 312 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 AC008011.1-201ENST00000545989 227 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 AL354760.1-201ENST00000608357 643 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 AP003485.2-201ENST00000623636 610 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 RNA5SP197-201ENST00000363357 119 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 MTHFD2P2-201ENST00000407725 247 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 AC063979.1-201ENST00000415539 377 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 HSPA8P19-201ENST00000505359 1517 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 Y_RNA.40-201ENST00000362645 93 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 OR13C3-201ENST00000374781 1108 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 NUP35P1-201ENST00000422734 947 ntBASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CSMD1Q96PZ7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
CSMD1Q96PZ7 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC2.9□□□□□ -1.94
CSMD1Q96PZ7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CSMD1Q96PZ7 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CSMD1Q96PZ7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
CSMD1Q96PZ7 AL513477.1-202ENST00000417061 214 ntBASIC2.9□□□□□ -1.94
CSMD1Q96PZ7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.9□□□□□ -1.94
CSMD1Q96PZ7 AC022080.3-201ENST00000544433 482 ntBASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms