Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC112487.2-201ENST00000637950 304 ntBASIC6.34□□□□□ -1.39
SYNGAP1Q96PV0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.34□□□□□ -1.39
SYNGAP1Q96PV0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNGAP1Q96PV0 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SYNGAP1Q96PV0 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.34□□□□□ -1.39
SYNGAP1Q96PV0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNGAP1Q96PV0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SYNGAP1Q96PV0 CASC19-260ENST00000641828 2001 ntBASIC6.34□□□□□ -1.39
SYNGAP1Q96PV0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.34□□□□□ -1.4
SYNGAP1Q96PV0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.34□□□□□ -1.4
SYNGAP1Q96PV0 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.34□□□□□ -1.4
SYNGAP1Q96PV0 AC112255.1-201ENST00000624070 2493 ntBASIC6.34□□□□□ -1.4
SYNGAP1Q96PV0 MTCO1P14-201ENST00000441695 1559 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 OR4K15-201ENST00000305051 1216 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 RNU4-73P-201ENST00000363164 141 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 U8.4-201ENST00000363626 134 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 Y_RNA.409-201ENST00000383990 98 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AC013442.1-201ENST00000397347 228 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 FAT1P1-201ENST00000406588 507 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 RNA5SP498-201ENST00000411342 120 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 RPS20P15-201ENST00000412792 311 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 EEF1A1P40-201ENST00000412883 573 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 OR51A3P-201ENST00000413596 924 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 TIMM9P3-201ENST00000428659 274 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 MTCYBP45-201ENST00000435243 565 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 RPL37P21-201ENST00000435890 276 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AC108463.1-201ENST00000450258 347 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 MTCYBP18-201ENST00000501056 747 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AC019235.1-201ENST00000503847 207 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 HMGB1P28-201ENST00000507778 552 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 Y_RNA.701-201ENST00000516812 110 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 RN7SKP99-201ENST00000517028 307 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AC022832.1-201ENST00000530718 645 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 MIR4436B2-201ENST00000581415 91 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 MIR4436B1-201ENST00000583272 91 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AC115286.1-201ENST00000604298 434 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AC093297.3-201ENST00000607056 2517 ntBASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SYNGAP1Q96PV0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 RNU6-492P-201ENST00000363035 104 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 RNU6-1122P-201ENST00000384449 107 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 MIR765-201ENST00000390226 114 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 RNA5SP339-201ENST00000390987 122 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AL356776.1-201ENST00000406574 447 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AC062016.2-201ENST00000420950 676 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 CRIP1P1-201ENST00000427567 185 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 CEACAMP7-201ENST00000444105 496 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 TPT1P12-201ENST00000448968 492 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 PMCHL2-203ENST00000457791 237 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AC092757.1-201ENST00000467293 467 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 OR52A4P-201ENST00000472867 958 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AC114981.1-201ENST00000503897 678 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AC022447.3-201ENST00000506865 495 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 RNU6-885P-201ENST00000516607 104 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 AC079075.1-201ENST00000559543 878 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 TVP23CP2-201ENST00000571473 623 ntBASIC6.32□□□□□ -1.4
SYNGAP1Q96PV0 BNIP3P23-201ENST00000599655 511 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms