Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RPRD1AQ96P16 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 SNORA57.1-201ENST00000391227 145 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 HMGB3P19-201ENST00000403971 560 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AL138878.1-201ENST00000405131 347 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AL356967.1-201ENST00000406305 431 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 Z86062.1-201ENST00000406773 777 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 RN7SKP177-201ENST00000410567 355 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 OR8F1P-201ENST00000425243 930 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AL160175.1-201ENST00000428124 247 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 TBCAP1-201ENST00000436520 327 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 SNRPGP5-201ENST00000456003 220 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AL133477.1-201ENST00000457472 514 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 RN7SL271P-201ENST00000487601 295 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 TPT1P3-201ENST00000492841 512 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 IGKV2-38-201ENST00000517443 247 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 HMGB1P46-201ENST00000520062 610 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AC091516.1-201ENST00000549191 703 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AC007599.1-201ENST00000568688 1174 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 MIR4286-201ENST00000580651 93 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AL606490.9-201ENST00000603331 271 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 BX322635.1-201ENST00000605804 496 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AC242628.1-201ENST00000606810 391 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AC024941.1-201ENST00000612250 334 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 MIR6875-201ENST00000617506 72 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AC095038.2-201ENST00000621464 1070 ntBASIC4.13□□□□□ -1.75
RPRD1AQ96P16 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RPRD1AQ96P16 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 RNU6-452P-201ENST00000384406 107 ntBASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AC010385.1-201ENST00000412374 256 ntBASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AC023050.1-201ENST00000498198 304 ntBASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AC025554.1-201ENST00000505641 188 ntBASIC4.12□□□□□ -1.75
RPRD1AQ96P16 MTCO1P31-201ENST00000506355 492 ntBASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AC010460.1-201ENST00000507087 466 ntBASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 USP9YP5-201ENST00000511770 630 ntBASIC4.12□□□□□ -1.75
RPRD1AQ96P16 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AL359715.5-201ENST00000623431 443 ntBASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AC004943.3-201ENST00000624116 600 ntBASIC4.12□□□□□ -1.75
RPRD1AQ96P16 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RPRD1AQ96P16 AC027287.1-201ENST00000553115 1453 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 RNU6-40P-201ENST00000384254 107 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC105402.1-201ENST00000413336 545 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 RPL7P53-201ENST00000421245 739 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 HIGD1AP4-201ENST00000430194 280 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AL031663.1-201ENST00000437445 219 ntBASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.11□□□□□ -1.75
RPRD1AQ96P16 RPS4XP15-201ENST00000489210 795 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms