Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 HSPD1P16-201ENST00000402302 394 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AL645931.1-201ENST00000439737 410 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AL671855.1-201ENST00000446875 1203 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 MTND6P33-201ENST00000571794 183 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 ZNF807-201ENST00000328088 1707 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AC010740.1-201ENST00000417035 684 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 USP9YP36-201ENST00000424581 829 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 USP9YP31-201ENST00000431405 881 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AF228730.2-201ENST00000438784 848 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 CYCSP35-201ENST00000451978 304 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AC067852.3-201ENST00000589177 561 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AC009303.3-201ENST00000591103 736 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AC107993.1-201ENST00000591343 684 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AC124856.1-201ENST00000600819 896 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AL450472.3-201ENST00000615578 367 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AC009464.1-201ENST00000615731 469 ntBASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC2.46□□□□□ -2.02
ALMS1Q8TCU4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 FAM35BP-202ENST00000497389 3337 ntBASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 UBA52P6-201ENST00000399822 382 ntBASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 EIF4A1P11-201ENST00000451239 222 ntBASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AC133473.1-201ENST00000455173 299 ntBASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 RPL32P34-201ENST00000486380 400 ntBASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 U4.6-201ENST00000621618 127 ntBASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AL512430.2-201ENST00000406786 339 ntBASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 Z99755.1-201ENST00000414048 380 ntBASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 RPL23AP71-201ENST00000470966 469 ntBASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 PPBPP1-201ENST00000510807 373 ntBASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AL049844.2-201ENST00000604280 628 ntBASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AC010374.2-201ENST00000512933 535 ntBASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC2.45□□□□□ -2.02
ALMS1Q8TCU4 MAPK10-303ENST00000641324 3959 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 RNU6-729P-201ENST00000384399 107 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 RPF2P1-201ENST00000424137 906 ntBASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
ALMS1Q8TCU4 AC008885.1-201ENST00000514930 301 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms