Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AP003392.5-201ENST00000607857 415 ntBASIC5.6□□□□□ -1.51
CFAP43Q8NDM7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.6□□□□□ -1.51
CFAP43Q8NDM7 AC015813.4-201ENST00000610469 179 ntBASIC5.6□□□□□ -1.51
CFAP43Q8NDM7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.6□□□□□ -1.51
CFAP43Q8NDM7 AC069209.1-201ENST00000619282 651 ntBASIC5.6□□□□□ -1.51
CFAP43Q8NDM7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.6□□□□□ -1.51
CFAP43Q8NDM7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CFAP43Q8NDM7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CFAP43Q8NDM7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CFAP43Q8NDM7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 AL139095.1-201ENST00000404326 391 ntBASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 U3.39-201ENST00000408569 239 ntBASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 MTND6P32-201ENST00000457611 483 ntBASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 AC020893.1-201ENST00000502452 580 ntBASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 MIR5680-201ENST00000577577 84 ntBASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 AL157762.1-201ENST00000619612 415 ntBASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 AC006386.2-201ENST00000624491 75 ntBASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 AC012005.1-201ENST00000624575 75 ntBASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.59□□□□□ -1.51
CFAP43Q8NDM7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 RNA5SP39-201ENST00000411245 120 ntBASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 NPM1P29-201ENST00000483112 803 ntBASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 AC073522.1-201ENST00000483312 377 ntBASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 AC011611.1-201ENST00000552179 197 ntBASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 AC034105.3-201ENST00000565294 442 ntBASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 AC006116.10-201ENST00000591836 581 ntBASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 AC013412.1-201ENST00000610687 192 ntBASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
CFAP43Q8NDM7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 SAGE2P-201ENST00000420011 2126 ntBASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 REREP1Y-201ENST00000422655 198 ntBASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 REREP2Y-201ENST00000439103 200 ntBASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CFAP43Q8NDM7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 IFNNP1-201ENST00000429219 553 ntBASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 AC099563.1-201ENST00000456086 418 ntBASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 RNU6-579P-201ENST00000516879 102 ntBASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 AP005262.1-201ENST00000582646 997 ntBASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 AL606834.2-201ENST00000602954 668 ntBASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CFAP43Q8NDM7 RNA5SP42-201ENST00000364278 115 ntBASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 RPL26P28-201ENST00000451325 435 ntBASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 PTGES3P3-201ENST00000511479 482 ntBASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 AC027281.1-201ENST00000574178 758 ntBASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 LARP7P3-201ENST00000579888 337 ntBASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 AL583832.1-201ENST00000603227 784 ntBASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 AC079298.2-201ENST00000623885 459 ntBASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 UBE2V1P2-201ENST00000397758 440 ntBASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 NPM1P17-201ENST00000479221 602 ntBASIC5.56□□□□□ -1.52
CFAP43Q8NDM7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms