Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 ATP5J2P6-201ENST00000565203 266 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 MIR3912-201ENST00000577566 105 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC106791.2-201ENST00000604680 391 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 COX6CP4-201ENST00000605798 228 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 FAM27B-201ENST00000610601 213 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AL121873.1-201ENST00000616013 524 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC090246.1-201ENST00000616499 426 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC022509.4-201ENST00000621404 572 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC079248.2-201ENST00000623779 326 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC073530.2-201ENST00000623987 261 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC067931.1-201ENST00000624190 671 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AP003497.2-201ENST00000624220 967 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC011266.1-201ENST00000624119 3569 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 AC100871.1-201ENST00000507871 1456 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 SGO1P2-201ENST00000429458 1589 ntBASIC4.36□□□□□ -1.71
CLIP4Q8N3C7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AL137100.1-201ENST00000556703 1620 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 INTS6P1-201ENST00000504674 2530 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 FAM3C2-201ENST00000312214 681 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 RNU1-108P-201ENST00000362556 161 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 RN7SKP149-201ENST00000363008 344 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 RNA5SP507-201ENST00000363603 121 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 RNU6-98P-201ENST00000384173 107 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC093719.1-202ENST00000392735 373 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 RNU4-34P-201ENST00000410431 124 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 RPL23AP27-201ENST00000415161 451 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AL035407.1-201ENST00000429211 571 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC104651.2-201ENST00000447549 528 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC022431.1-201ENST00000450941 438 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 SCARNA10-201ENST00000459255 330 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC092754.2-201ENST00000463506 460 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 LINC00888-204ENST00000487386 421 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC093755.1-201ENST00000512950 1023 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 RNU6-232P-201ENST00000517144 64 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AP003033.1-201ENST00000527244 415 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 OR5AZ1P-201ENST00000527448 943 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC092747.2-201ENST00000545069 983 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 HMGN2P6-201ENST00000551091 273 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 NIFKP8-201ENST00000560500 874 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC008638.3-201ENST00000603341 463 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AL139395.1-201ENST00000603662 160 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC090425.2-201ENST00000608818 501 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC016769.4-201ENST00000616893 535 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC131238.1-201ENST00000617135 328 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AC091931.1-201ENST00000623488 728 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 AP005901.5-201ENST00000545779 1796 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 MAPK10-320ENST00000641462 6696 ntBASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CLIP4Q8N3C7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms